Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3454 |
Symbol | |
ID | 3962561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3843318 |
End bp | 3845189 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637918272 |
Product | histidine kinase |
Protein accession | YP_524692 |
Protein GI | 89902221 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACCCC ATCAAACAAA GCTACTCAGC CGCGTTGGCC TGTTTCTGGG TTTTGTGACC CTCATCGCCG GAGCCAGCCT GTTCGCCTTC CGCTTCAGCT TGGCCATGGG CCTGGCCGAG TTGCAGGTCA CCGGGCGCCA CCGGTTGGAC CTGTACGCCA CCAGCCTGGA GCGGGAAATC GACAAGTACG CCTACTTTTC CACCACCCTG GGTCTGGAGC GGGACGTGCT GCAAATGCTG GCCGCACCCC ACCCGACCCG GACGGCGCAG GTGAACCAAT ACCTGGAACA GCTCAACGAG CGGGCTGGCA CCCTCTCGAT CTACGTGCTG GACAGCAAGG GCAAAGTCCT GGCCACCAGC AACTGGCGCC GGCCCGACAG CTTTCTTGGG GAGGATCTCT CTTTTCGTCC CTATTTTCGC CAGGCCATGG AGACCGGCAG CGGGCGCATC TTTGGCATCG GCACCACCCG GGGCGAGCCC GGATACTACC TGGCCTCGTC CTTGACCAAT GGCCAGGGCA CGGTAGGCGT GGCCGTGGTC AAGGTGGGCC TGCAACAACT GGAAAAATCC TGGGTCACGG CGGAAGCGCC GGTCCTGGTC GCCGATGAGA ACGGCGTGGT CATCCTAGCC TCGGTGCGGG ACTGGAAGTT CACCACCCTG ACACCCCTGG ACGAAGCCAC CCGCCGCGCC TTTGACCGCA CCCAGCAATA CAACCGCCGC GCCCTCAATC CCTTGGGCGT GGTGGAAATG ACGGCACTGG AGCACGGCGC CCGCCTGGTG TCCCTGCCCA AGCTGGGGCC GGAGATGGTC TCCATGTTTC CCGTCGCCGG CAAGTTCCTG GCCCAGACCC AGCCGCTGCC CGGCAGCCCC TGGAGCATCA CGGTCTTCTC CCTGCAGGAG CAGGTGCGTG GCATGGCAGC CAACCGGGCG GCCGTGGCTG GCGTGGGCGC AGCCTTCCTG TGCATCCTGA CGCTGATGCT GAACGAGCGG CGACGCCATC TGAAAGACCG GCTGGCGGCC CGGGAGGCGC TCCAGCAAGC GCACGACGAA CTCGAACGCA AGGTAGTGGA GCGCACCGCC GACCTCTCTG CCGCCAACAC CCGCTTGCAA GTGGAGGTGG CAGAACGCAC CCGGGCCGAG CGCACCTTGC GTGCCGCTCA AGACGAGCTG GTCCAGGCCG GCAAGCTGGC CGTTATCGGC CAGCTCTCCT CCGGCATCGC CCACGAGCTG AATCAACCGC TGGCGGCGCT ACGCACCCTC TCCGGCAATG CCCGCAAGTT CCTCGCCCGC GGTGACCAGC AGACCGCTGA CAGCAACCTG AATCGCATCG CCGACCTGGT GGATCGGATG GGCCGCCTCA CGGGCCAGTT GAAATCCTTC GCCCGCAAGT CCTCGGGCCG CCCCCAGGTC GTACCGCTGC GCCGGGCCGT GGATAACGCC CTGTTCCTGT TGGAGCAGCG CTTGAGGCGC GCTGGCGTCG TGGCCTGCAT CGATCTGTCG GACGAAGAGC TGCAAGCCTG GTGCGATGCC AACCGGCTGG AGCAGGTGCT GGTGAATCTG GCCGGGAACG CCCTGGACGC CATGGAAGGC CAGCCGGCAC AAGCGCTCGA CATCACCGCC CGGCGCCAGG GCGAGCGGAT TCTGATCCAG GTGCGGGACC GAGGGCCGGG CCTGTCCGCG CAAGCACGAA CACACCTGTT CGAACCGTTT TTCACGACCA AGGAGGCAGG CAGTGGCCTG GGACTCGGCT TGACCATCTC TGCCGGTATC GTCGCCGATT TTGGCGGCAG CCTGTCTGGC GACAATCATC CAGAAGGCGG CGCCATCTTC ACGCTGGACA TTCCAGCCGC CCCAGGAGGG CCAACAACAT GA
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Protein sequence | MSPHQTKLLS RVGLFLGFVT LIAGASLFAF RFSLAMGLAE LQVTGRHRLD LYATSLEREI DKYAYFSTTL GLERDVLQML AAPHPTRTAQ VNQYLEQLNE RAGTLSIYVL DSKGKVLATS NWRRPDSFLG EDLSFRPYFR QAMETGSGRI FGIGTTRGEP GYYLASSLTN GQGTVGVAVV KVGLQQLEKS WVTAEAPVLV ADENGVVILA SVRDWKFTTL TPLDEATRRA FDRTQQYNRR ALNPLGVVEM TALEHGARLV SLPKLGPEMV SMFPVAGKFL AQTQPLPGSP WSITVFSLQE QVRGMAANRA AVAGVGAAFL CILTLMLNER RRHLKDRLAA REALQQAHDE LERKVVERTA DLSAANTRLQ VEVAERTRAE RTLRAAQDEL VQAGKLAVIG QLSSGIAHEL NQPLAALRTL SGNARKFLAR GDQQTADSNL NRIADLVDRM GRLTGQLKSF ARKSSGRPQV VPLRRAVDNA LFLLEQRLRR AGVVACIDLS DEELQAWCDA NRLEQVLVNL AGNALDAMEG QPAQALDITA RRQGERILIQ VRDRGPGLSA QARTHLFEPF FTTKEAGSGL GLGLTISAGI VADFGGSLSG DNHPEGGAIF TLDIPAAPGG PTT
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