| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3367 |
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| Symbol | |
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| ID | 3964230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3737822 |
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| End bp | 3738961 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637918187 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_524607 |
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| Protein GI | 89902136 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCCA AATCCATTGC TGCCAGCACC GATGCCTGGT ATGCGAACGT TGTCGCCAAT
GCCACCGACC GCACCGGTCA GACTGACAAC GAACGCATCA AGGACATCAC CGTGTTACCG
CCTCCCGAGC ATTTGATCCG CTTTTTCCCC ATTCACGGAA CGGCCGTGGA GTCGCTGATC
AGCAGCACCC GCCGGCGCAT CCACAACATC ATGGCGGGCA AGGATGACCG CTTGCTGGTG
GTGATTGGCC CGTGTTCCAT CCACAACCCG GCCGCCGCGC TGGACTATGC GCGCCAGCTT
CAGGTGCAGC GCGAAAAGTA CGCCGACACG CTGGAAATTG TGATGCGCGT CTACTTTGAA
AAACCCCGCA CCACCGTCGG CTGGAAGGGC CTGATCAACG ACCCGTATCT GGACGAAACC
TTTCGCATCG ACGAAGGCCT GCGCATCGCG CGCCAGTTGC TGATCGAGAT CAACCGCCTG
GGCCTGCCCG CCGGCAGCGA GTTTCTGGAT GTGATTTCAC CCCAGTACCT GGGTGACTTG
ATCTCCTGGG GCGCGATTGG TGCGCGCACC ACCGAGAGCC AGGTGCACCG CGAACTGGCC
TCGGGGCTGT CGGCGCCGAT AGGCTTCAAG AACGGCACCG ATGGCAACAT CAGGATCGCC
ACCGACGCGA TTCAGGCCGC CGCCGGCGCG CACCACTTTT TGTCCGTGCA CAAGAATGGT
CAGGTGGCGA TCGTGCAAAC CAAAGGCAAT AAAGACTGCC ACGTCATCTT GCGCGGTGGC
AAGGCCCCCA ACTATGACGC GGCCAGCGTC GCTGCAGCGT GCAAAGACCT CGAAAAAGCC
AAACTGCCGG CGACCTTGAT GGTCGACTGC AGCCACGCCA ACAGCAGCAA GCAACACGAG
AAGCAACTCG ACGTGGCACG CGACATTGCC GCACAGCTGG CCAGCGGCTC AAGAAGTGTG
TTCGGCGTGA TGGTGGAAAG CCACTTGATC GCCGGTGCCC AGAAGTTCAC GCCGGGCAAG
GACGACCTGT CCAAGCTGGA ATACGGCAAG AGCATCACCG ACGCCTGCCT GGGTTGGGAC
GACTCGGTCG AATTGCTGGA GGTGTTGGCG GCGGCAGTCA AAGCGCGCCG GGCGGGCTAA
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| Protein sequence | MTAKSIAAST DAWYANVVAN ATDRTGQTDN ERIKDITVLP PPEHLIRFFP IHGTAVESLI
SSTRRRIHNI MAGKDDRLLV VIGPCSIHNP AAALDYARQL QVQREKYADT LEIVMRVYFE
KPRTTVGWKG LINDPYLDET FRIDEGLRIA RQLLIEINRL GLPAGSEFLD VISPQYLGDL
ISWGAIGART TESQVHRELA SGLSAPIGFK NGTDGNIRIA TDAIQAAAGA HHFLSVHKNG
QVAIVQTKGN KDCHVILRGG KAPNYDAASV AAACKDLEKA KLPATLMVDC SHANSSKQHE
KQLDVARDIA AQLASGSRSV FGVMVESHLI AGAQKFTPGK DDLSKLEYGK SITDACLGWD
DSVELLEVLA AAVKARRAG
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