| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3356 |
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| Symbol | |
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| ID | 3964219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3725928 |
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| End bp | 3727328 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637918176 |
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| Product | UDP-N-acetylmuramate |
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| Protein accession | YP_524596 |
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| Protein GI | 89902125 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATATTC ATATTCTTGG TATTTGTGGC ACTTTCATGG GTGGTTTGGC CGCTTTGGCA
CGGGAGGCTG GCCACAAAGT CACCGGCTGC GACGCCGGCG TTTATCCGCC CATGAGCGAC
CAGTTGCGAG CGCTTGGCAT TGACCTGATT GAAGGCTTCG GCGCCGACCA GTTGGCACTT
GTCCCTGACA TGTTTGTGGT GGGTAACGTG GTCAGCCGCG CCCACCTGGC CGATGGAAGC
CCGAAATTTC CCTTGATGGA AGCCATTCTG GACGCAGGCC TGCCCTACAC CAGCGGCCCC
CAGTGGCTGG CCGAGCACAT CCTGCAGGGT CGGCATGTCA TCGCCGTCGC GGGCACCCAT
GGCAAAACGA CCACCACCGC CATGGTCGCC TGGATACTGG AATGCGCTGG TTTGCAGCCC
GGATTTCTGG TCGGCGGCGT ACCGGTGAAT TTTGGCGTGT CAGCCCGTTT GGGGGCAGGC
CGGACTTTTG TGATCGAAGC CGACGAATAC GACACCGCAT TTTTCGACAA GCGCAGCAAA
TTTGTGCATT ACCGGCCGCG CACCGCCGTG CTCAACAACC TCGAATTCGA CCACGCTGAC
ATTTTTGATG ACCTGGCCGC GATTGAGCGC CAATTTCATC ACCTGCTGCG CACCGTGCCA
GGCGCAGGCC CGCACGGTTC GGGTCGGGTC GTCGTCAACG GACTGGAAGA AAGCCTGGCA
CGGGTGATCC ACGCGGGCTG CTGGAGTGAA GTCCGCAGCT TTGGCGCGGT GGTCAGTGAT
TTCACGGCAC GCGGTGAGCC GCAGGAATTC GACGTGTTGT ACCAGAACCA ACTCGTCGGC
CACGTGAAGT GGGCACTAAC TGGCGTACAC AACCAGCTCA ATGCACTGGC GGCCATTGCG
GCGGCCCAAC ATGTGGAGGT TTCGCCCGAG GCCGCCGCCC GCGCGCTGGG CAGCTTTGAG
AATGTGAAAC GACGCATGGA AATTCGCGGC AGCGTGCAGC GCGCTGATGG CAGCATCACG
GTGTACGACG ACTTTGCCCA CCACCCAACC GCCATTCGTA CAACCGTCGA CGGTCTGCGG
CGAAAGCTGG GCCCCAAGCA ACGCATCCTG GCGGTGTTTG AGCCGCGCAG CAACACCATG
AAGCTCGGCA CCATGAAAGC CCAATTGCCG TGGAGTCTGG CCGATGCCGA TCTGGCTTTT
TGCCACGGGG GTGGACTGGG CTGGGATGCG CGCGAGGCCT TGGCCAGCAT GGGCGCCAAA
GCCCAGGTGG CCGACACCAT CGATGACTTG GTGGCGCAGG TGGTGGCGCA AGCGAGAGCG
GGCGACCACA TCCTGTGCAT GAGCAACGGC GGCTTTGGCG GCGTTCACCT GAAGCTGTTA
CAGGCGCTAG AAAATAGATA G
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| Protein sequence | MHIHILGICG TFMGGLAALA REAGHKVTGC DAGVYPPMSD QLRALGIDLI EGFGADQLAL
VPDMFVVGNV VSRAHLADGS PKFPLMEAIL DAGLPYTSGP QWLAEHILQG RHVIAVAGTH
GKTTTTAMVA WILECAGLQP GFLVGGVPVN FGVSARLGAG RTFVIEADEY DTAFFDKRSK
FVHYRPRTAV LNNLEFDHAD IFDDLAAIER QFHHLLRTVP GAGPHGSGRV VVNGLEESLA
RVIHAGCWSE VRSFGAVVSD FTARGEPQEF DVLYQNQLVG HVKWALTGVH NQLNALAAIA
AAQHVEVSPE AAARALGSFE NVKRRMEIRG SVQRADGSIT VYDDFAHHPT AIRTTVDGLR
RKLGPKQRIL AVFEPRSNTM KLGTMKAQLP WSLADADLAF CHGGGLGWDA REALASMGAK
AQVADTIDDL VAQVVAQARA GDHILCMSNG GFGGVHLKLL QALENR
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