Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3351 |
Symbol | prmA |
ID | 3964214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3721698 |
End bp | 3722603 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637918171 |
Product | ribosomal protein L11 methyltransferase |
Protein accession | YP_524591 |
Protein GI | 89902120 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2264] Ribosomal protein L11 methylase |
TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.908701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGAAC TGACCTTGAT GTGCCCGGAG AACCGGGTTG GGACCTTGAG TGACACGCTC GAAGCGCTGG ACGCCTTGAG TGTCAGTATT GAGGATGCCG ATGCCCAGAC CGATGCCGAG CAGGCTTTGT TCGGAGAGCC TGGCATGCCG CCACCCAAAA CGGGTTGGCA GCGCTCGCGG GTAAGCGCGT TGTATGCCTC TGAGGTGTTG GCGAAAGAAG CCTTGGACCT GTTGCAAGCG CAGGATTTTT TTGCGGACTG CCAACTGTTG GGTATGCAGG CCGTGGCGGA GCAGGATTGG GTGCGTTTGA CCCAGTCCCA GTTCACGCCG GTGGAAATTA CGCCAGAGTT CTGGATCGTG CCGACCTGGC ACGAACCGCC CGCGCAGGCC CGCATTGTCA TTCGTCTCGA CCCGGGTTTG GCGTTTGGCA CTGGCACCCA CCCGACCACC CGCATGTGTT TGCGCTGGAT TGCCCAGCGT GGTCACGGCG ATGAATCCAC AGTCAATCAT GCGCTGGGCC GGGTGCTGGA TTACGGTTGT GGCTCGGGCA TTCTCGCCAT CGGCGCGGCC AAGTATGGCG CCACTGACAT TGACGCAGTT GATATTGATG ATGCGGCGGT TGAATCGACC GTGCTGAATG CGCAGGCCAA TCAGGTTCAT CTGAAGGCCG GCTTCCCGGA TGCCGCCACG GGTGTCTATC AAACCGTGTT GGCCAATATT CTGGCGACTC CCTTGAAGGT GCTGGCGCCC TTGTTGTGGT CGCATGTGGC GCCCGGCGGC TCGCTGGTAT TGGCCGGCAT TCTTGGCACC CAAGCTGATG AGCTGAAAGC GGCTTACGCA CCCTATTGCC AATTGGTGAT TTCGGATCAG CAAGAGGGCT GGATATTGAT GACCGCGTCA AACTGA
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Protein sequence | MFELTLMCPE NRVGTLSDTL EALDALSVSI EDADAQTDAE QALFGEPGMP PPKTGWQRSR VSALYASEVL AKEALDLLQA QDFFADCQLL GMQAVAEQDW VRLTQSQFTP VEITPEFWIV PTWHEPPAQA RIVIRLDPGL AFGTGTHPTT RMCLRWIAQR GHGDESTVNH ALGRVLDYGC GSGILAIGAA KYGATDIDAV DIDDAAVEST VLNAQANQVH LKAGFPDAAT GVYQTVLANI LATPLKVLAP LLWSHVAPGG SLVLAGILGT QADELKAAYA PYCQLVISDQ QEGWILMTAS N
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