Gene Rfer_3337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3337 
Symbol 
ID3963036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3702839 
End bp3706447 
Gene Length3609 bp 
Protein Length1202 aa 
Translation table11 
GC content59% 
IMG OID637918157 
Producthypothetical protein 
Protein accessionYP_524577 
Protein GI89902106 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTA TTGTCAAAGT CATTTTTATG GTGTTCGTGC TGCTGGCGGG CCAAGCGATG 
GCAGTCACCT GCACCAGCAA CGGCAGTGGT GATTGGAAAG ACAACAACTG GACGCCGTCT
GACCCTTGTG AAAATGGCTC GTCCGGGCCG CCAGCCGGCA GCAATGTTGT CATTGCGAAC
GGCTACAACA TTAAGGTGGA CGCCAATACG CTCGCCGTAG CCAATGTCAC CATCAACGCA
GGCGGTACCT TGCGGGGAAA TGGCGGCGAC ACGCTAAGCC TGACTGGCAA CTTCACCAAC
AATGGCACGT TCGCGGCAAA TGGCGGCACG GTGGCACTCA CCGGGGCGGC CCAGACCATT
ACCGGCAATG TGACTTTCTA CAACTTGTCG TTTGGAAGCA CCCTGCTCAC GCTTGCTGGC
AATGTGACTG TGACCAATAA TGTGACCGGG ACGATCAATC TGGCTTCCAC CTGTCCGGCG
GACTACACAT TGACGCTTCC CAATGGCAAC GTGATGCACA GTTGCAACTC GTCAACGGTT
GATTCCATCA ACAGGGCGAG CGCCAGCCCG ACAACGGCCG GTGCTGTAGT GGCCTGGACG
GTCGTGTTCA GCACCAGCGT GACCGGGGTA AGTACAGGCA ATTTTGGGCT TGCTCCGACG
GGTGGTGTGA CTGGCGCAGC GATCACTTCG GTGGCAGGTT CTGGTACCAC CTGGACGGTC
AATGCGACGA CGGGAACTGG CACCGGCGCC GGCACGCTGG GCTTGAACAT GGTGAATGTC
GCCGGCATCA GTGCGGCGGT GACGACGGCG ATGCCCTTTG CTGGACAGGT CTATACGATT
TCCGGACCGT TTTGTTCGCC ACCGTCAAAT ATTCCTGCAG GTGTGACTGT GTCTTGCCAG
TGCGACACCT TCGCGCGTGC CAGCCTGAAT CCATCCACCA TCTTCAGCTC AAACTGGCTC
GTCTCCACCA GTGACAGCAC CGGCATCCTG CCGAGCATCG TGAATCCCGG CTATCTGCGC
TTGACCAACA ATACCGGCAA CAACGCCAAG GCCGCCACCG TGCCGGGCAT CTTCCCCGCG
GCTGGCAATT ACATTTCGGT CGAGTTTCAG CAATACGCCT ACAACGGTAC GGGTGCCGAC
GGGATCGCGG TGACGCTTTC CGATTATTCG GTCCCCGCCG TGCCGGGGGC CTACGGCGGT
TCGTTGGGTT ATGCGCAGGA AACAGGGATC CATGATGGGT TCGCTGGAGG CTGGCTGGGT
GTGGGGCTGG ACGAGTACGG CAACTACCAA AATACGAACG AGGGGCGTCT GGGCGGACCG
GGTTTCACCG TGCAATCGGT CGGCGCGCGC GGTTCCGGCG CTGGCCAGAC CGGTTATCGT
TTTCTTGGCG GCACCCCCAG CTTGATCCCC AACATTGACG ACCGCACGTC CACCTCGGCC
TCACGGGGCT ACTACTACCA GGTCATCGTG GATGCACGTA ACGAACCGAC GAGCACGGCC
GTCGCTGTCA ATCGCGACAC CGGAAGTGGG TATTCTTCTC TTATCAATAT TCCAAACGTA
TACAGCGCCG CCACTACGAA TGGATTCACT CAGGCACCGG TTCCGGCCAA CTGGCAAATT
TCCTTCACGG GCTCTACCGG TGGCTCCACC AATATCCACG AGATTGGTGG TTTGCGTATC
TGCGCCTCGT CGATGTTGCC GCCAGGTGGT GGCACCGCCA GTGGTTTCAA CGCTGTCGAT
GAAGCCTATG GCACGCCGCC CGGCGTGGCG GTACAGAACT ATCTGAGTGG CCACATCTAT
ACCAAGCTGG CGGGCACTCC CTTCAAGCTC AACGTGGCCG CGCTGACCAA CAGTCAGATC
GTGACCACTT ATGCGTATGG CGGCAGCAAG TCAGTGACCG TCAAACTGGT GGATAACAGC
GATAGTCTGG CAGACACGAG CAAGGACTGC ACGCTGTCGT GTACCAGCAC CTGCACCGGC
AAGCCTGCGG TCACTGGTGG CACGCAAACA CTGACCTTCG CTTCTGGCGC GCCTGACAAA
GGTCAGAAAC AGTCGTCCAG TTTCACCATC AATTCGGCCT ATAAAAAACT GCTGGCCATC
ATCAGTGATG GCACAAGCTC GGCGTGTTCA ACCGACTCGT TCTCGGTACG GCCAAACGCG
CTCACGCTGG CAACCACGGC GACTGCCACC ACCTCTGGTG GCACGCCGGT CTTCAGGGCT
GGCACAGACC CGTTCACCGT CAACGTGTCG GCGGCGAACA CGGGTTATAC CGGTACACCA
ACTATTGGCA GCATTGACAC CAGTCCGATG GGTGTCGGCA CCTGGCTGGC CGGCAGCCTC
TCAGCGGGTA CGACCTTGGC TGCTGCGGTG TTGGGTGTTT CAACCAACAG CTCAACCTAC
AGTGAAGTTG GCCTATTCAA GTTGGCTGGT TACGGTGTCA GCGACGATAC GTCAGCGCGT
GGTGTGTTCG ACGCCACCTG GACCGGGGTT GACAGTATCA GCACCAAGGG CGACTGTGTG
GCTGGCAATT ACTCAAACGT TAAAAACGCA AGCGGAAAAT ACGGCTGCAA CTTCGGGCTG
GCCACCGACG CCATTTTTGG GCGGTTCATA CCGCATCACT TTGATGTCAG CATCAACTCG
AACGGAACCA TGGCGGCGGC GTGCCCGGCA GGCGGCTTTA CCTACACCGG GCAGGCCATG
GGCTACGGCA CTGCGCCCTC GTTGACCATC AAACCGATGA ACGCTGCGAC TGGCGGCGCC
GTCACGCAGA ACTATCAGGG CATCTTCCAG AAGCTGGTGG CCTCGGGAGT GTCAATCACC
TCACCCACGG CCGATGCCAC CCAACCGGGC AGGGATGGCG TGACCAAGAC CGATCTGCTG
GCAATTCCTG CGATGGGTGT CGGCACGCTT GCTAACAGCA GCGGAATAAT CACCTACACG
CTCAACGCGA GCGATCAATT CACCTACACC CGCAACGCCA ATGCATTGAT TGGGCCCTAC
ACCAGCGCGA TCCCGCTGGT CGTGACGGCA GTGCTTGAAA GCGAGGTTAA CGCGACGAGC
TCCTTGCCTG CCTTGCCGCA GACGCTGAGT CCAACCGGTA TCTCCATGCG TTACGGCCGG
GCACGCATGT TCAATGCCTA CGGCTCGGAG TTGCTTGATT TGCCGGTCGT GTTCCGTGCT
GAATATTTGG CAGGCACTGC TCCTGGCAAT GCTTGGAGCG TCAACACCTC GGACTCATGT
ACCAACGCGG CTTTGTTTTT TGCACCAGTC GCTGCCCCCA ACATCACAAG CAACACCTGT
GTGCTGGAGC CTGGCAACAA CAGCGGCATG GGCTGCGCTG TCGCTTTGAC GCCAACACAG
ATCAACCGCC GCTATCTGGA GACTGGTGTG ACAGGCACCG ACAGCAACGG CGTGGCTGGT
TTTGCCGGCA ACTTCAACCT GTGGCTCAGA GCACCCGGCG CAACGCATGT GGGCTCCATT
AACATCACGG CCACGGTTGA TTCCTGGCTG CAATACCCCT GGACTGGTTC CGCCAATGTC
AACCCGAGTG CCCGCGCCAC CTTTGGCATC TACAAATCAC CCCTGATCTA CCGCCGTGAA
AACTATTAA
 
Protein sequence
MKIIVKVIFM VFVLLAGQAM AVTCTSNGSG DWKDNNWTPS DPCENGSSGP PAGSNVVIAN 
GYNIKVDANT LAVANVTINA GGTLRGNGGD TLSLTGNFTN NGTFAANGGT VALTGAAQTI
TGNVTFYNLS FGSTLLTLAG NVTVTNNVTG TINLASTCPA DYTLTLPNGN VMHSCNSSTV
DSINRASASP TTAGAVVAWT VVFSTSVTGV STGNFGLAPT GGVTGAAITS VAGSGTTWTV
NATTGTGTGA GTLGLNMVNV AGISAAVTTA MPFAGQVYTI SGPFCSPPSN IPAGVTVSCQ
CDTFARASLN PSTIFSSNWL VSTSDSTGIL PSIVNPGYLR LTNNTGNNAK AATVPGIFPA
AGNYISVEFQ QYAYNGTGAD GIAVTLSDYS VPAVPGAYGG SLGYAQETGI HDGFAGGWLG
VGLDEYGNYQ NTNEGRLGGP GFTVQSVGAR GSGAGQTGYR FLGGTPSLIP NIDDRTSTSA
SRGYYYQVIV DARNEPTSTA VAVNRDTGSG YSSLINIPNV YSAATTNGFT QAPVPANWQI
SFTGSTGGST NIHEIGGLRI CASSMLPPGG GTASGFNAVD EAYGTPPGVA VQNYLSGHIY
TKLAGTPFKL NVAALTNSQI VTTYAYGGSK SVTVKLVDNS DSLADTSKDC TLSCTSTCTG
KPAVTGGTQT LTFASGAPDK GQKQSSSFTI NSAYKKLLAI ISDGTSSACS TDSFSVRPNA
LTLATTATAT TSGGTPVFRA GTDPFTVNVS AANTGYTGTP TIGSIDTSPM GVGTWLAGSL
SAGTTLAAAV LGVSTNSSTY SEVGLFKLAG YGVSDDTSAR GVFDATWTGV DSISTKGDCV
AGNYSNVKNA SGKYGCNFGL ATDAIFGRFI PHHFDVSINS NGTMAAACPA GGFTYTGQAM
GYGTAPSLTI KPMNAATGGA VTQNYQGIFQ KLVASGVSIT SPTADATQPG RDGVTKTDLL
AIPAMGVGTL ANSSGIITYT LNASDQFTYT RNANALIGPY TSAIPLVVTA VLESEVNATS
SLPALPQTLS PTGISMRYGR ARMFNAYGSE LLDLPVVFRA EYLAGTAPGN AWSVNTSDSC
TNAALFFAPV AAPNITSNTC VLEPGNNSGM GCAVALTPTQ INRRYLETGV TGTDSNGVAG
FAGNFNLWLR APGATHVGSI NITATVDSWL QYPWTGSANV NPSARATFGI YKSPLIYRRE
NY