Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3337 |
Symbol | |
ID | 3963036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3702839 |
End bp | 3706447 |
Gene Length | 3609 bp |
Protein Length | 1202 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637918157 |
Product | hypothetical protein |
Protein accession | YP_524577 |
Protein GI | 89902106 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATTA TTGTCAAAGT CATTTTTATG GTGTTCGTGC TGCTGGCGGG CCAAGCGATG GCAGTCACCT GCACCAGCAA CGGCAGTGGT GATTGGAAAG ACAACAACTG GACGCCGTCT GACCCTTGTG AAAATGGCTC GTCCGGGCCG CCAGCCGGCA GCAATGTTGT CATTGCGAAC GGCTACAACA TTAAGGTGGA CGCCAATACG CTCGCCGTAG CCAATGTCAC CATCAACGCA GGCGGTACCT TGCGGGGAAA TGGCGGCGAC ACGCTAAGCC TGACTGGCAA CTTCACCAAC AATGGCACGT TCGCGGCAAA TGGCGGCACG GTGGCACTCA CCGGGGCGGC CCAGACCATT ACCGGCAATG TGACTTTCTA CAACTTGTCG TTTGGAAGCA CCCTGCTCAC GCTTGCTGGC AATGTGACTG TGACCAATAA TGTGACCGGG ACGATCAATC TGGCTTCCAC CTGTCCGGCG GACTACACAT TGACGCTTCC CAATGGCAAC GTGATGCACA GTTGCAACTC GTCAACGGTT GATTCCATCA ACAGGGCGAG CGCCAGCCCG ACAACGGCCG GTGCTGTAGT GGCCTGGACG GTCGTGTTCA GCACCAGCGT GACCGGGGTA AGTACAGGCA ATTTTGGGCT TGCTCCGACG GGTGGTGTGA CTGGCGCAGC GATCACTTCG GTGGCAGGTT CTGGTACCAC CTGGACGGTC AATGCGACGA CGGGAACTGG CACCGGCGCC GGCACGCTGG GCTTGAACAT GGTGAATGTC GCCGGCATCA GTGCGGCGGT GACGACGGCG ATGCCCTTTG CTGGACAGGT CTATACGATT TCCGGACCGT TTTGTTCGCC ACCGTCAAAT ATTCCTGCAG GTGTGACTGT GTCTTGCCAG TGCGACACCT TCGCGCGTGC CAGCCTGAAT CCATCCACCA TCTTCAGCTC AAACTGGCTC GTCTCCACCA GTGACAGCAC CGGCATCCTG CCGAGCATCG TGAATCCCGG CTATCTGCGC TTGACCAACA ATACCGGCAA CAACGCCAAG GCCGCCACCG TGCCGGGCAT CTTCCCCGCG GCTGGCAATT ACATTTCGGT CGAGTTTCAG CAATACGCCT ACAACGGTAC GGGTGCCGAC GGGATCGCGG TGACGCTTTC CGATTATTCG GTCCCCGCCG TGCCGGGGGC CTACGGCGGT TCGTTGGGTT ATGCGCAGGA AACAGGGATC CATGATGGGT TCGCTGGAGG CTGGCTGGGT GTGGGGCTGG ACGAGTACGG CAACTACCAA AATACGAACG AGGGGCGTCT GGGCGGACCG GGTTTCACCG TGCAATCGGT CGGCGCGCGC GGTTCCGGCG CTGGCCAGAC CGGTTATCGT TTTCTTGGCG GCACCCCCAG CTTGATCCCC AACATTGACG ACCGCACGTC CACCTCGGCC TCACGGGGCT ACTACTACCA GGTCATCGTG GATGCACGTA ACGAACCGAC GAGCACGGCC GTCGCTGTCA ATCGCGACAC CGGAAGTGGG TATTCTTCTC TTATCAATAT TCCAAACGTA TACAGCGCCG CCACTACGAA TGGATTCACT CAGGCACCGG TTCCGGCCAA CTGGCAAATT TCCTTCACGG GCTCTACCGG TGGCTCCACC AATATCCACG AGATTGGTGG TTTGCGTATC TGCGCCTCGT CGATGTTGCC GCCAGGTGGT GGCACCGCCA GTGGTTTCAA CGCTGTCGAT GAAGCCTATG GCACGCCGCC CGGCGTGGCG GTACAGAACT ATCTGAGTGG CCACATCTAT ACCAAGCTGG CGGGCACTCC CTTCAAGCTC AACGTGGCCG CGCTGACCAA CAGTCAGATC GTGACCACTT ATGCGTATGG CGGCAGCAAG TCAGTGACCG TCAAACTGGT GGATAACAGC GATAGTCTGG CAGACACGAG CAAGGACTGC ACGCTGTCGT GTACCAGCAC CTGCACCGGC AAGCCTGCGG TCACTGGTGG CACGCAAACA CTGACCTTCG CTTCTGGCGC GCCTGACAAA GGTCAGAAAC AGTCGTCCAG TTTCACCATC AATTCGGCCT ATAAAAAACT GCTGGCCATC ATCAGTGATG GCACAAGCTC GGCGTGTTCA ACCGACTCGT TCTCGGTACG GCCAAACGCG CTCACGCTGG CAACCACGGC GACTGCCACC ACCTCTGGTG GCACGCCGGT CTTCAGGGCT GGCACAGACC CGTTCACCGT CAACGTGTCG GCGGCGAACA CGGGTTATAC CGGTACACCA ACTATTGGCA GCATTGACAC CAGTCCGATG GGTGTCGGCA CCTGGCTGGC CGGCAGCCTC TCAGCGGGTA CGACCTTGGC TGCTGCGGTG TTGGGTGTTT CAACCAACAG CTCAACCTAC AGTGAAGTTG GCCTATTCAA GTTGGCTGGT TACGGTGTCA GCGACGATAC GTCAGCGCGT GGTGTGTTCG ACGCCACCTG GACCGGGGTT GACAGTATCA GCACCAAGGG CGACTGTGTG GCTGGCAATT ACTCAAACGT TAAAAACGCA AGCGGAAAAT ACGGCTGCAA CTTCGGGCTG GCCACCGACG CCATTTTTGG GCGGTTCATA CCGCATCACT TTGATGTCAG CATCAACTCG AACGGAACCA TGGCGGCGGC GTGCCCGGCA GGCGGCTTTA CCTACACCGG GCAGGCCATG GGCTACGGCA CTGCGCCCTC GTTGACCATC AAACCGATGA ACGCTGCGAC TGGCGGCGCC GTCACGCAGA ACTATCAGGG CATCTTCCAG AAGCTGGTGG CCTCGGGAGT GTCAATCACC TCACCCACGG CCGATGCCAC CCAACCGGGC AGGGATGGCG TGACCAAGAC CGATCTGCTG GCAATTCCTG CGATGGGTGT CGGCACGCTT GCTAACAGCA GCGGAATAAT CACCTACACG CTCAACGCGA GCGATCAATT CACCTACACC CGCAACGCCA ATGCATTGAT TGGGCCCTAC ACCAGCGCGA TCCCGCTGGT CGTGACGGCA GTGCTTGAAA GCGAGGTTAA CGCGACGAGC TCCTTGCCTG CCTTGCCGCA GACGCTGAGT CCAACCGGTA TCTCCATGCG TTACGGCCGG GCACGCATGT TCAATGCCTA CGGCTCGGAG TTGCTTGATT TGCCGGTCGT GTTCCGTGCT GAATATTTGG CAGGCACTGC TCCTGGCAAT GCTTGGAGCG TCAACACCTC GGACTCATGT ACCAACGCGG CTTTGTTTTT TGCACCAGTC GCTGCCCCCA ACATCACAAG CAACACCTGT GTGCTGGAGC CTGGCAACAA CAGCGGCATG GGCTGCGCTG TCGCTTTGAC GCCAACACAG ATCAACCGCC GCTATCTGGA GACTGGTGTG ACAGGCACCG ACAGCAACGG CGTGGCTGGT TTTGCCGGCA ACTTCAACCT GTGGCTCAGA GCACCCGGCG CAACGCATGT GGGCTCCATT AACATCACGG CCACGGTTGA TTCCTGGCTG CAATACCCCT GGACTGGTTC CGCCAATGTC AACCCGAGTG CCCGCGCCAC CTTTGGCATC TACAAATCAC CCCTGATCTA CCGCCGTGAA AACTATTAA
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Protein sequence | MKIIVKVIFM VFVLLAGQAM AVTCTSNGSG DWKDNNWTPS DPCENGSSGP PAGSNVVIAN GYNIKVDANT LAVANVTINA GGTLRGNGGD TLSLTGNFTN NGTFAANGGT VALTGAAQTI TGNVTFYNLS FGSTLLTLAG NVTVTNNVTG TINLASTCPA DYTLTLPNGN VMHSCNSSTV DSINRASASP TTAGAVVAWT VVFSTSVTGV STGNFGLAPT GGVTGAAITS VAGSGTTWTV NATTGTGTGA GTLGLNMVNV AGISAAVTTA MPFAGQVYTI SGPFCSPPSN IPAGVTVSCQ CDTFARASLN PSTIFSSNWL VSTSDSTGIL PSIVNPGYLR LTNNTGNNAK AATVPGIFPA AGNYISVEFQ QYAYNGTGAD GIAVTLSDYS VPAVPGAYGG SLGYAQETGI HDGFAGGWLG VGLDEYGNYQ NTNEGRLGGP GFTVQSVGAR GSGAGQTGYR FLGGTPSLIP NIDDRTSTSA SRGYYYQVIV DARNEPTSTA VAVNRDTGSG YSSLINIPNV YSAATTNGFT QAPVPANWQI SFTGSTGGST NIHEIGGLRI CASSMLPPGG GTASGFNAVD EAYGTPPGVA VQNYLSGHIY TKLAGTPFKL NVAALTNSQI VTTYAYGGSK SVTVKLVDNS DSLADTSKDC TLSCTSTCTG KPAVTGGTQT LTFASGAPDK GQKQSSSFTI NSAYKKLLAI ISDGTSSACS TDSFSVRPNA LTLATTATAT TSGGTPVFRA GTDPFTVNVS AANTGYTGTP TIGSIDTSPM GVGTWLAGSL SAGTTLAAAV LGVSTNSSTY SEVGLFKLAG YGVSDDTSAR GVFDATWTGV DSISTKGDCV AGNYSNVKNA SGKYGCNFGL ATDAIFGRFI PHHFDVSINS NGTMAAACPA GGFTYTGQAM GYGTAPSLTI KPMNAATGGA VTQNYQGIFQ KLVASGVSIT SPTADATQPG RDGVTKTDLL AIPAMGVGTL ANSSGIITYT LNASDQFTYT RNANALIGPY TSAIPLVVTA VLESEVNATS SLPALPQTLS PTGISMRYGR ARMFNAYGSE LLDLPVVFRA EYLAGTAPGN AWSVNTSDSC TNAALFFAPV AAPNITSNTC VLEPGNNSGM GCAVALTPTQ INRRYLETGV TGTDSNGVAG FAGNFNLWLR APGATHVGSI NITATVDSWL QYPWTGSANV NPSARATFGI YKSPLIYRRE NY
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