| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3322 |
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| Symbol | |
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| ID | 3962963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3686721 |
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| End bp | 3688544 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637918142 |
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| Product | acetolactate synthase 3 catalytic subunit |
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| Protein accession | YP_524562 |
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| Protein GI | 89902091 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.437675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTAT CAAAAGCCCG AATCGCGTCG GCGGCAGCAA AGACCGCGGC AACCAGTCAA
ACACCCACGA CCCCAGTCAA ACAACTCGTT GCGACGCCAG ACGAGAACGA ACTTCGGGGT
GCCGAGATTC TCATCAAGGC CCTGCAGGCT GAAGGCGTCA AGTACGTCTG GGGCTATCCC
GGCGGCGCCG TGCTGCACAT TTACGACGCG CTGTATAAAC AAGACACGAT CCAGCACATT
CTGGTTAGGC ACGAGCAAGC AGCGGTGCAC GCAGCCGACG GCTATGCACG CGCCACTGGC
GAGGTCGGCG TGGCCCTGGT CACTTCAGGG CCTGGTGTAA CCAATGCGGT CACCGGTATC
GCCACCGCCT ATATGGACAG CATCCCGATG GTGATTGTGT CTGGGCAAGT GCCCACCAGC
GCCATCGGCA TGGACGCTTT TCAGGAGTGC GACGCGGTGG GCATCACACG CCCCGTGGTT
AAACACAATT TCCTGGTCAA GGACGCCCAT CAACTGGCCG AGACCATGAA AAAGGCCTTT
CACATCGCGC GCAGTGGACG CCCGGGCCCG GTCCTGGTCG ACATCCCGAA AGATGTTTCG
TTCAAAAAAG TGCATTACGC GGGCTACCCG GCTACGCTTG AGATGCGCTC TTACAACCCG
GTGCGCAAAG GCCATGGCGG GCAAATTCGC AAGGCGCTTC AGCTCTTGCT GGCGGCCAAG
CGGCCCTATA TCTACACCGG TGGCGGCGTG CTGCTGAGCA ACGCCTCTGC TGAGTTGCGA
ACCCTGGTGG ACATGCTGGG CTACCCATGC ACCAACACCC TGATGGGCTT GGGTGCGTAT
CCGGCCAGTG ACAAGAAATT CCTTGGCATG CTGGGCATGC ACGGTACGGT GGAAGCCAAC
AACGCGATGC AGCATTGCGA CGTGCTGCTG GCCATCGGCG CCCGCTTTGA TGACCGTGTC
ATTGGCAACC CCAAGCATTT TGCCCAGAAT GAACGCAAGA TCATCCACAT CGACATCGAC
CCCTCAAGCA TCTCCAAACG GGTCAAAGTG GATATCCCGA TTGTGGGCGA TGTCAAAGAG
GTGCTGTCCG AAATGATCGC CATGATCAAG GAGGGTGCTG TCAAGCCCGA TGCCGACGCA
CTGGGTGCCT GGTGGGACAC GATCGAAGGC TGGCGCAAGC GCGATTGCCT CAAATACGAT
CACGGCAAGA ATGATGTCAT CAAGCCGCAG TTCGTGATTG AGACGCTCTG GAAAATGACC
AAGGATGCGG ATACGTACAT CACGTCCGAC GTTGGTCAGC ACCAGATGTG GGCGGCTCAG
TACTATCGAT TCGATGAACC ACGGCGTTGG ATCAATTCCG GTGGCTTGGG CACCATGGGC
GTGGGCATTC CCTACGCCAT GGGCATCAAG CTGGCCAAGC CTGATAGCGA GGTGTACTGC
ATTACAGGCG ATGGTTCGGT GCAAATGTGC ATTCAGGAGC TCTCCACTTG CTTGCAGTAC
AACACCCCGA TCAAAATCCT GTCACTCAAC AACCGCTACC TCGGTATGGT GCGCCAATGG
CAGGAGGTTG AATACGAAGG TCGCTACAGT CACAGTTACA TGGATGCGCT GCCCAACTTT
GTGAAGCTGG CTGAAGCGTA TGGCCACGTG GGCATGCTGG TTGAGCGGGC GCAGGACGTG
GAGCCGGCGC TGCGCGAAGC GCGCAAGCTC AAGGACCGGA CGGTTTTCAT GGATATCCGC
ACCGACCCGA CCGAGAACGT GTTCCCCATG GTGAAAGCCG GCAAGGGCAT TACTGAAATG
CTGCTCGGCT CCGAAGATCT TTAG
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| Protein sequence | MELSKARIAS AAAKTAATSQ TPTTPVKQLV ATPDENELRG AEILIKALQA EGVKYVWGYP
GGAVLHIYDA LYKQDTIQHI LVRHEQAAVH AADGYARATG EVGVALVTSG PGVTNAVTGI
ATAYMDSIPM VIVSGQVPTS AIGMDAFQEC DAVGITRPVV KHNFLVKDAH QLAETMKKAF
HIARSGRPGP VLVDIPKDVS FKKVHYAGYP ATLEMRSYNP VRKGHGGQIR KALQLLLAAK
RPYIYTGGGV LLSNASAELR TLVDMLGYPC TNTLMGLGAY PASDKKFLGM LGMHGTVEAN
NAMQHCDVLL AIGARFDDRV IGNPKHFAQN ERKIIHIDID PSSISKRVKV DIPIVGDVKE
VLSEMIAMIK EGAVKPDADA LGAWWDTIEG WRKRDCLKYD HGKNDVIKPQ FVIETLWKMT
KDADTYITSD VGQHQMWAAQ YYRFDEPRRW INSGGLGTMG VGIPYAMGIK LAKPDSEVYC
ITGDGSVQMC IQELSTCLQY NTPIKILSLN NRYLGMVRQW QEVEYEGRYS HSYMDALPNF
VKLAEAYGHV GMLVERAQDV EPALREARKL KDRTVFMDIR TDPTENVFPM VKAGKGITEM
LLGSEDL
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