Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3303 |
Symbol | |
ID | 3962888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3666648 |
End bp | 3668072 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637918123 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_524543 |
Protein GI | 89902072 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.125384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGGC GCGACCTGCT GCAGTCCGGT GCCCTCGTGC TGTTGCTGGG CGCACAGCAC CTGGCCCGGG GCGCCACCAT CCTGGCGGTG CGGGTGTGGC CGGCGCCCGA CTACTCGCGC GTCACCATTG AGTCCGACAC GGCCCTCAAG GTCAAACAGT TTTTTATCGC CAACCCGCCG CGCCTGGCGG TGGACATCGA GGGCATCGAA CTCAACCCTG CGCTCAAGGA ACTGGTGGCC AAGGTGCGCA GCGACGACCC CAATATTGCG GGTATTCGGG CCGGACAAAA CGCGCCGGGC ACGGTGCGTC TGGTGCTGGA CTTGAAGCAG CCCATAGCCC CTCAGGTCTT CACGCTGACG CCGGTCGCCG CCTACCAGCA CCGGCTGGTG TTCGATTTGT ACCCCACGCA GGTGAGTGAC CCGCTGGAGG CGCTGATTGC CGATCGGATC AAAGACCAGG CGCGGGCAAG CCCCGGCCCT GCCACCCCCG TCACGGGCGA TCCTTTGGGT GAACTGATCG CCCAGCACAC CCAGCGACCC CCTCTCAAGC TGGGTGGCCC GGATTCAGTC CTGAACACGG CCAACGCCAA AATTACTAGC AATTCAGTAG CTAATAGTGA CCAATCCACG GGGGCCAAGG GCCAAAAAGG TATCAATATT TTCGGTACGG ACAACGCGCC GGTCCAGTCG CCTGCCGTCA CCGACCGCTT GATCATCATT GCCCTTGACC CCGGCCACGG CGGTGAAGAT CCCGGCGCCA TCGGCCCCGG CGGCACGCGG GAAAAAGACG TGGTGTTGCG CCTGGCGCAC CGATTGCGCG ATCGCATTAA TGCCACCGTC ATCAAGGGCA ACACCATGCG CGCCTACCTC ACGCGCGACG CCGACTTCTT TGTGCCGCTG CATGTGCGGG TACAAAAGGC GCGCCAGGTC CAGGCGGACC TTTTTGTCAG CCTGCATGCC GACGCCTTCT TCACCCCGCA TCCGCAGGGC GCCAGCGTGT TTGCCCTGAG CCAGGGCGGC GCCTCCAGCA GTGCGGCGCG CTGGATGGCA GCGAAGGAAA ACAAGGCCGA CCTGATCGGT GGCTTGAATG TCAAGGCCCG GGACGCCCAA GTGACGCGGG CCCTGTTTGA CATGAGCACC ACCGCCCAGA TCAACGACAG CCTGAAGCTC GGCAGCGCCA TGCTGGGTGA AATTGGCCGA GTTGGCAAGC TGCACAAAGG CCGGGTCGAG CAAGCCAGCT TTGCCGTTCT GAAGGCGCCC GACATCCCCA GTGTGCTGGT GGAGGCTGCT TTTATCAGCA ACCCGGAAGA AGAGATCAAA CTCAACAGCG AGGCCTACCA GGAGCAGTTG GCCAGCGCGC TGATGCGCGG CATTGAAGGC TACTTCTCCA AAAATCCGCC GCTGGCCCGA AATCGTTCGG TTTAA
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Protein sequence | MKRRDLLQSG ALVLLLGAQH LARGATILAV RVWPAPDYSR VTIESDTALK VKQFFIANPP RLAVDIEGIE LNPALKELVA KVRSDDPNIA GIRAGQNAPG TVRLVLDLKQ PIAPQVFTLT PVAAYQHRLV FDLYPTQVSD PLEALIADRI KDQARASPGP ATPVTGDPLG ELIAQHTQRP PLKLGGPDSV LNTANAKITS NSVANSDQST GAKGQKGINI FGTDNAPVQS PAVTDRLIII ALDPGHGGED PGAIGPGGTR EKDVVLRLAH RLRDRINATV IKGNTMRAYL TRDADFFVPL HVRVQKARQV QADLFVSLHA DAFFTPHPQG ASVFALSQGG ASSSAARWMA AKENKADLIG GLNVKARDAQ VTRALFDMST TAQINDSLKL GSAMLGEIGR VGKLHKGRVE QASFAVLKAP DIPSVLVEAA FISNPEEEIK LNSEAYQEQL ASALMRGIEG YFSKNPPLAR NRSV
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