Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3295 |
Symbol | |
ID | 3962880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3658254 |
End bp | 3659591 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637918115 |
Product | guanine deaminase |
Protein accession | YP_524535 |
Protein GI | 89902064 |
COG category | [F] Nucleotide transport and metabolism [R] General function prediction only |
COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
TIGRFAM ID | [TIGR02967] guanine deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.403629 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCCT ACCGCGCCGC CATTCTGCGT TTCGCCCCCG AGCGCGAGCC ACGCCACGCG GCTGTTTTCG AAGAAGACGG TCTGCTGGTC GTGGGCCCCA ATGGCGCCGG CATGCAGGTG GTGCAGGCGG TGGGTCCGTA CCGGGAGCTG AAGGACCGCG TCCCTGGTGT GGAGATCGAG CACCTGCCGG GGCGCATCAT CGCCCCCGGC TTTGTGGACC TGCATATCCA CTTTCCGCAG ACCAAGGTCA TCGGCTCACC CGCCGATGGT TTGTTGCCGT GGTTGGAGAA GTACACATTT CCCGAGGAAA AACGCTTCTC AGCCCCCGAA TACAGTGCAC AAGAAGCTAC ATTTTTCATA GCGGAACTGT TGCGCAACGG CGTCACGACG GCGCTGGCGT TTGCCACCGC ACACGCCGAA TCGGTCGACG CGCTGTTCAC CGCGGCGCTG CATCGGCGTC TGCGCCTGAT CACCGGGCTG TGCCTGATGG ACCGCCATGC CCCGGCCGAG CTGCTCAACC GCGCCGCACC CGACGGGACG CTGGATGCGA CCGAGCAAAG CTTGATCGAC TCCGAGGCCT TGCTGCAAAA ATGGCATGGC AGGGGCCGTC TGGGTTATGC CATCACGCCG CGTTTTGCGC CCAGTTGTTC AGCGGCCCAA TTGCGCGGGG CCGGCGTGTT GGCGACCAAA TATCCCGGGG TCTGGATTCA GTCGCATGTG GCGGAGAACC TCGATGAGAT CAAATGGGCG CGCGCGTTGT TTCCCGCCTC GCGCAGCTAC CTGGGCACCT ATGCCGATTT CGGCCTGATG CGCCCGCGCG CAATTTACGC TCACTGCCTT CACCTCGATG AGATGGATCG CGCCCTGATG CGCGACACCG GTGCCAGCGC CGCGGTTTGC CCGACCAGCA ATCTGTTTCT GGGCAGCGGC TTTTTTGACT ATGCGGCGGC CGACCGGGCC GGCTTCTCCT ACGGCCTGGC CAGCGATGTG GGCGGGGGCA CCAGTTTCAG TCCGTTTCAC ACCATGCTGG CGGCCTACTA CGTGGGCCGC GAAGGGCAGA CCAAAGCGGG CTTGTCGCTG GCGCCGCAGC ATTTGTGGTG GCAACACACC TTGGGCGCAG CGCAGGCGCT GGGGCTGGAC GGCCGACACG GTGCGCCAGC GGTGGGCAAT CTGCAGCCCG GTTGCGAAGC CGATTTCGTG GTCTTGAACC CGCAGGCCAC GCCTTTGCTG GCGCGCCGGA CCGCGAGCGC CCACAGTCTC GATGAGCTGC TGTTTGCCAT GATCGTGCTG GGCGATGACC GACTGGTGGA AAAGACGGTT ATCTCTCAAA ACATTTAA
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Protein sequence | MKAYRAAILR FAPEREPRHA AVFEEDGLLV VGPNGAGMQV VQAVGPYREL KDRVPGVEIE HLPGRIIAPG FVDLHIHFPQ TKVIGSPADG LLPWLEKYTF PEEKRFSAPE YSAQEATFFI AELLRNGVTT ALAFATAHAE SVDALFTAAL HRRLRLITGL CLMDRHAPAE LLNRAAPDGT LDATEQSLID SEALLQKWHG RGRLGYAITP RFAPSCSAAQ LRGAGVLATK YPGVWIQSHV AENLDEIKWA RALFPASRSY LGTYADFGLM RPRAIYAHCL HLDEMDRALM RDTGASAAVC PTSNLFLGSG FFDYAAADRA GFSYGLASDV GGGTSFSPFH TMLAAYYVGR EGQTKAGLSL APQHLWWQHT LGAAQALGLD GRHGAPAVGN LQPGCEADFV VLNPQATPLL ARRTASAHSL DELLFAMIVL GDDRLVEKTV ISQNI
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