| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3285 |
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| Symbol | |
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| ID | 3962432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3647360 |
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| End bp | 3648142 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637918105 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_524525 |
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| Protein GI | 89902054 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAAAG GCCACACCGC CCTTGTCACG GGCTCAACCC AGGGAATTGG CCTGGCCATC
GCCCACGCGC TGGCGCGCGC CGGGGCCAAC GTCGTTGTGC ACGGCATCGA GTCGATGGCG
CAGGGGCATG CCATCGCGAC CCAAGTGGCT GCCATGGGCG GGGTGCGCGC CGCCTATGTG
CGTGCCAACC TCGCCCTCGC CGACGAGGCC GCCGGGCTGG TGGCCGCCGC CACGCAGGCT
CTGAGCGCGC CCGATATTCT GGTCAACAAC GCAGGCATCC AGTACACCTG CCCGATCGAG
AGTTTTCCAG CCGAACGCTG GGACGCGATC CTGGCGGTCA ACCTGTCGGC AGCCTTTCAC
ACCATGAAGG CGGCGGTGCC GGGCATGCGC GAGCGCGGCT GGGGCCGCAT CGTCAACATC
GCCTCGGTGC ACGGCTTGGT GGCCTCGGTC AACAAAGGGG CATACCTGGC CGCCAAACAC
GGACTGGTGG GCTTGTCCAA AGGCGTGGCG CTGGAAACCG CCGCCCAAGG CATCACTGTC
AATTGCATCT GCCCGGGCTG GACCGACACC GCGATCATCC AGCCGCAGAT CGAGGCGCGC
GCCGCCCAGT TCGGTGGCGA CCGCCATGCG GGCATCCGCG ACCTGCTGAG CGAGAAGCAG
CCCAACCTGA CGCTGTTACC TCCCGAACGC ATCGGCGATG TGACCGTATT TCTGTGCGGC
CAGGCAGGGG CAGGCATCAC CGGCGTGGCC TTGCCGGTCG ATGGTGGCTG GACAGCGCAG
TGA
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| Protein sequence | MLKGHTALVT GSTQGIGLAI AHALARAGAN VVVHGIESMA QGHAIATQVA AMGGVRAAYV
RANLALADEA AGLVAAATQA LSAPDILVNN AGIQYTCPIE SFPAERWDAI LAVNLSAAFH
TMKAAVPGMR ERGWGRIVNI ASVHGLVASV NKGAYLAAKH GLVGLSKGVA LETAAQGITV
NCICPGWTDT AIIQPQIEAR AAQFGGDRHA GIRDLLSEKQ PNLTLLPPER IGDVTVFLCG
QAGAGITGVA LPVDGGWTAQ
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