| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3256 |
|---|
| Symbol | |
|---|
| ID | 3960793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 3610355 |
|---|
| End bp | 3611197 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637918076 |
|---|
| Product | formate dehydrogenase, subunit FdhD |
|---|
| Protein accession | YP_524496 |
|---|
| Protein GI | 89902025 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
|---|
| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.340615 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTGCCGT ATCTGACCCA GGCCCGCGCG CCGCTGACGC GTGAGGTGAC TGCGCTCAAT
GAATGGGGTG ACGTGGACAC GGTCTCCATC CCGGCTGAGC GCGCGCTCAC CGTTTATGTC
GACAAGCGCG AATTGGTGAC GCTGATGACG CTGGGCGCCC AGCCCGAGCT GCTGGTGCTG
GGCTTCTTGC GCAACCAGCG CCTGGTGCAA TCGGTGCAGG AGATCGAATC CATTACCGTC
GATTGGGACG TGGGCGCCGC TGCCGTCAAA ACGCGCCAGG GCATCTCGGA CATTGAAGCG
CGCACCGCCA AACGGGTGGT CACCACCGGT TGCGGCCAGG GCAGCGTGTT TGGTGACCTG
ATGGCGGAGG TGGACCGTCT GGTGCTGCCG GCGGCCACGC TGACGCAAAA GCAGCTGTAC
GGCATCGTCA ACGCCATCCG GCTACAAGAG ACCACCTACA AGTCATCCGG CTCCGTGCAT
GGCTGTGCCT TGTTTCGGGG CGAAGAAATG TTGGTATTCG TGGAAGATGT GGGCCGCCAC
AACGCGATTG ACACCATTGC GGGCTGGATG TGGCTGCAAT CCGATGAGGC CATGAGCGGT
CAGGATAAAG TTTTTTACAC CACCGGCCGC CTGACCAGCG AGATGGTGAT CAAGTCGGCG
CAAATGGGGG TGCCGATTGT GGTGTCGCGC AGCGGCATCA CCCAAATGGG GCACGACGTG
GCGCAGCGCC TGGGTTTGTG CGCCATTGGC CGCGCCACCA ACAAGCGTTT TCTTTGCTAC
AGCGCCGCCG AGCGCTTGCT GCTGCAGCCT GGCCTGGTGG GCGCCCGGCT CGCCGCCGCC
TGA
|
|---|
| Protein sequence | MLPYLTQARA PLTREVTALN EWGDVDTVSI PAERALTVYV DKRELVTLMT LGAQPELLVL
GFLRNQRLVQ SVQEIESITV DWDVGAAAVK TRQGISDIEA RTAKRVVTTG CGQGSVFGDL
MAEVDRLVLP AATLTQKQLY GIVNAIRLQE TTYKSSGSVH GCALFRGEEM LVFVEDVGRH
NAIDTIAGWM WLQSDEAMSG QDKVFYTTGR LTSEMVIKSA QMGVPIVVSR SGITQMGHDV
AQRLGLCAIG RATNKRFLCY SAAERLLLQP GLVGARLAAA
|
|---|
| |