Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3184 |
Symbol | |
ID | 3963054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3521847 |
End bp | 3523274 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637918003 |
Product | RND efflux system, outer membrane lipoprotein, NodT |
Protein accession | YP_524424 |
Protein GI | 89901953 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATCAA CCATATATGA AGCTTCTGGG TCTCGCCGGG CCTGCTCACG CACCTTGGCA CTTGCCATAT TTCCCTTGTT CATCCTGAGC GGCTGTGCGT CCTGGTCTGC CAGGACCGCG GATACGCCGG CTGTTGACGT GCCCACGCAT TGGTCGACGG CCGTGTCGTC CAACAACGCG CAAGCACCTG CAACTTCACT TGCGCAGTGG TGGCAAAGAT TCAACGACCC GCTGCTCAGC ACCCTGGTGA CGCAGGCTTT GCAGGCCAAC ACCAGCATCC TGTCGGCGCA AGCCGCGCTG CAGCAGGCAC GAGCGCTACG CGACGTGAGA ACCGCCGGCC TGTTGCCGGG TGTGAATGCC TCCGGGTCAG CACAACGTAG CAAGTCCGGC GATAACGATG CCAGCAACAG TTTTAGAGCC GGGCTGGACG CCAGTTGGGA ACCCGATATT TTTGGCGGCA AACGCAGCGC CCTGAACGCC AGCGAAGCCG ACGCCCAGGC CGCCCAGACC ACGCTGGCCG ATGTGCAGGT GTCCATCGCC GCCGAGGTGG CACTGGCCTA CATCCAGTTG CGCGGCCAGC AGGCGCAATT GCTGATTGCC CGCAACAACC TCGCCAGCCA GACAGAAACT CTGCAAATTA CCGATTGGCG TGCACAGGCC GGGCTGATCA CGTCGCTGGA AGTGGAGCAA TCGCGCGCCT CTACCGAGCA AACCCGGGCC CAAATCCCTG CGCTGGAAGC CAGCATCGCC AAGACCCGGC ACAGCCTGGC GGTGCTGACC GGTCAGCCGC CTGACTCCCT GCAGGCACTG ATCAACGACC CGACGGCGGT GCCGCAAGCG GCGCCGGACT TGGCCCTGAG CATTCCAGCG CAAACGCTGC GCCAGCGTCC CGATGTGCGC ACCGCAGAAC ACCGCATCAG CGCCGCACTG GCACAGGTCT CTGCGGCCGA CGCGGCGCGC TATCCCGGGT TTTCCATCGG CGGCTCGCTC GGGCTCAACG CCTTGACGCT TGCCGGGCTG GGCAGCGGGG CTACGGTAGC CACCGCCTTG TTGGCCAGCG TCTCGGTGCC GCTGTTTGAC GGTGGTGCCG CGCGCTCGCA GGTGCTGGCG CAAGAGGCCG CGCTGGAGCA GGCCCGGGTC AACTACCAAG CCGTTGTGTT GACCGCCCTG AAAGATGTCG AAGACGCCTT GGTGGCGTTG CAGGGCGACC GCGCCCGGCT CATCCATTTG CAAGGGGCCG CCACCGCGGC TGGCAACGCG GACCTGATGG CGCAACAGCG CTACAGCAGC GGCCTGATTG ACTTCCAGAC CGTGTTGCAG ACCCAGCGCA CGCTGCTCAG TGCCCAAGAC AGCGTCGCCA GCACCGAGGC CGACGTCAGC GCCGACCATG TGCGCCTGTA CAAGGCGCTG GGGGGCGGCT GGAACTGA
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Protein sequence | MTSTIYEASG SRRACSRTLA LAIFPLFILS GCASWSARTA DTPAVDVPTH WSTAVSSNNA QAPATSLAQW WQRFNDPLLS TLVTQALQAN TSILSAQAAL QQARALRDVR TAGLLPGVNA SGSAQRSKSG DNDASNSFRA GLDASWEPDI FGGKRSALNA SEADAQAAQT TLADVQVSIA AEVALAYIQL RGQQAQLLIA RNNLASQTET LQITDWRAQA GLITSLEVEQ SRASTEQTRA QIPALEASIA KTRHSLAVLT GQPPDSLQAL INDPTAVPQA APDLALSIPA QTLRQRPDVR TAEHRISAAL AQVSAADAAR YPGFSIGGSL GLNALTLAGL GSGATVATAL LASVSVPLFD GGAARSQVLA QEAALEQARV NYQAVVLTAL KDVEDALVAL QGDRARLIHL QGAATAAGNA DLMAQQRYSS GLIDFQTVLQ TQRTLLSAQD SVASTEADVS ADHVRLYKAL GGGWN
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