Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3175 |
Symbol | |
ID | 3962700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3511388 |
End bp | 3512878 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637917994 |
Product | thermostable carboxypeptidase 1 |
Protein accession | YP_524415 |
Protein GI | 89901944 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2317] Zn-dependent carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCATC CCCTGATCCA AAACCTGACC GCCACTTTTA CCCGTCTTTA CCGCTATTCG CATCTGGCGG CGATCGCTGG CTGGGATCAG TCGGCCATGA TGCCGCCCAA AGGCAATGAG GCACGCGCCG CGGCGCTGGC AGAACTTCAG GTGTTGATGC ACCAGACCCT GACCAGCGAA GCGCTGGCCG GTCTGTTTCA GGCTGCCAGT GGCGAAGCGC TGGATGACGC CGAACAAGCG TCGGTGCGGG AAATGCGCCG CCAGTGGCAA CAAGCCAAGC TGCTGCCCGA ACGTTGGGTG GAGGCGCAAA GTCTGGCCGC GTCGCGTTGT GAGCACGCCT GGCGCACGCA ACGCCAGCAA AACGACTGGA CCGGCTTCCT GGGCAATTTC CGCGCAGTCG TGGCGCTGGC GCGCGAAGAA GCCAAGCGGC TGGTGGACGC CAAGGGCGGC AGTTGTTATG ACGCCTTGAT GGACAAATAT GAACCCGGCA TGCGCTCCAA TGACATGGAC CGCATTTTTG GCGACGTTAA AAGCTGGTTG CCGGAACTGA TCGGGAAGAC CCTGGACAAA CAGTCGCTTG AAACCGTGAT CAAGCCGCAA GGGCTGTTTC CGGTGGATCA GCAGCGCTCG CTCGGTATTG AGATCATGAG CCTATTGGGA TTCGACTTCG AGGCCGGCCG GCTGGACGTT TCCACCCACC CGTTTTGCGG CGGCGTGGCC GAAGATGTGC GCATCACCAC GCGCTACAGC GAAGATGATT TCATGCGCAG CCTGATGGGT ACCGTCCACG AGACGGGACA CGCCCGCTAC GAACAAAATC TGCCTCGCGA GCGGGTTCAT TTGCCGGTGG GGCAAGCCCG TTCCATGGGC ATTCACGAGA GCCAAAGCCT GTCGTTTGAA ATGCAGTTGG GCCGCAGCCC GCAATTTCTG GCCTTGATTG CGCCGCTGCT GCAAAAACAC CTGGGCCGGC AAGCGGCGTT CGAGGCCGGC AATCTGGCCG CGCTGTTCAC TCGTGTCCAG CCCGGCTTGA TTCGGGTCGA TGCGGATGAG TTGACTTATC CGGCCCATGT CATCTTGCGT TACGAAATTG AGCGCGCACT GATAGAGTGC GAGATTGAAG CCGAGGACAT CCCGGCGCTG TGGGATGAAA AGATGATGTC TTATCTGGGC GTTGATACCC GCGGCAATTT TCAGGATGGC TGCATGCAGG ACATCCATTG GCCGGGCGGC AGCTTTGGTT ATTTCCCGAG CTACGCGCTG GGGTCGATGT ACGCCGCGCA GTTTTTTGCG ACGATTCGCA GCGGGCAGCC TGATCTGGAT GCCCAGGTGC TGGCGGGCAA TCTGTCACCT GTTTTCAACT GGCTTGAAAA GCATATCTGG CGCGAGGCGA GTCGCTGGCC AACCGATGAG TTGGTCAAGC GTGCGACTGG TGAAACACTC AATCCTGCCC ATTTCCGCAG GTACCTGGAA CAACGCTATC TGGCGGCCTG A
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Protein sequence | MIHPLIQNLT ATFTRLYRYS HLAAIAGWDQ SAMMPPKGNE ARAAALAELQ VLMHQTLTSE ALAGLFQAAS GEALDDAEQA SVREMRRQWQ QAKLLPERWV EAQSLAASRC EHAWRTQRQQ NDWTGFLGNF RAVVALAREE AKRLVDAKGG SCYDALMDKY EPGMRSNDMD RIFGDVKSWL PELIGKTLDK QSLETVIKPQ GLFPVDQQRS LGIEIMSLLG FDFEAGRLDV STHPFCGGVA EDVRITTRYS EDDFMRSLMG TVHETGHARY EQNLPRERVH LPVGQARSMG IHESQSLSFE MQLGRSPQFL ALIAPLLQKH LGRQAAFEAG NLAALFTRVQ PGLIRVDADE LTYPAHVILR YEIERALIEC EIEAEDIPAL WDEKMMSYLG VDTRGNFQDG CMQDIHWPGG SFGYFPSYAL GSMYAAQFFA TIRSGQPDLD AQVLAGNLSP VFNWLEKHIW REASRWPTDE LVKRATGETL NPAHFRRYLE QRYLAA
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