| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3130 |
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| Symbol | |
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| ID | 3962526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3469065 |
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| End bp | 3470066 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637917949 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_524370 |
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| Protein GI | 89901899 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0780017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAC CCACCTCTTC TTCCTCCTGG CTGGCCCGTT TGAGCGGCGA CCAAGCCAAA
CAAAAGCTGC TGGCATTTGC CAGCCTGATT GCGCTGATCG CCGTGTTCAC CGTACTCAAA
CCCGATGCCT TCATGACGCA GGACAACATC ATTGGCATCC TGCAGTCCAC CACCGTGATT
GGTGTGCTGG CCATTGCCAG CACCTTCATC ATCATCACCT CGGGCATTGA CCTGTCGGTG
GGCGTGCTGA TGACGTTTTG CGCCGTGATG GCAGGCGTGT TCATGGTCAA CCTGGGATTG
CCCATGCCGC TGGGCATCGT CTGCGCCCTG GCCATGGGCG CGCTGTCGGG CTGCTTGTCG
GGCCTGGCCA TCACCAAGCT GCGGGTGCCG CCGTTCATTG CCACGCTGGG CATGATGATG
ATGCTCAAGG GCAGCTCGCT CATCATTACC CAGACCCGGC CGATTTACTT CAGTGATGTC
GCGGGCTTTG ACCAGATCGC CCTGGGCTCG CTGATTGGCG ACTTGATCCC TTCACTGCCC
ATCCCCAACG GCGTGCTGAT CCTGTTTCTG GTGGCGGTGG TGTGCGCGGT GATCCTGAAC
AAAACCGCCC TGGGCCGCTA CACCTTTGCC TTGGGCAGCA ATGAAGAGGC GGTGCGCTTG
TCAGGTGTCA ATGTCAACCG TTGGAAGATC ATCATCTACG CCTTTTCCGG AGGCATTTGT
GGCATTGCCG GCTTGCTGAT TGCCTCACGT CTGAATTCAG CGCAACCCGC GCTGGGCCAG
GGCTACGAGC TCGATGCGAT TGCGGCAGTG GTGATTGGTG GCACGTCGCT CAGCGGCGGT
GTCGGCACGA TTTTGGGCAC CCTCATCGGC GCTTTCATCA TGAGCGTGCT GATCAATGGA
CTGCGCATCA TGTCGGTCGC CCAGGAGTGG CAAATGGTGC TGACCGGGCT GATCATCATC
CTGGCGGTCT ACACCGACAA CCTGCGGCGC AACAAGAAGT AA
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| Protein sequence | MTQPTSSSSW LARLSGDQAK QKLLAFASLI ALIAVFTVLK PDAFMTQDNI IGILQSTTVI
GVLAIASTFI IITSGIDLSV GVLMTFCAVM AGVFMVNLGL PMPLGIVCAL AMGALSGCLS
GLAITKLRVP PFIATLGMMM MLKGSSLIIT QTRPIYFSDV AGFDQIALGS LIGDLIPSLP
IPNGVLILFL VAVVCAVILN KTALGRYTFA LGSNEEAVRL SGVNVNRWKI IIYAFSGGIC
GIAGLLIASR LNSAQPALGQ GYELDAIAAV VIGGTSLSGG VGTILGTLIG AFIMSVLING
LRIMSVAQEW QMVLTGLIII LAVYTDNLRR NKK
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