| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3116 |
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| Symbol | |
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| ID | 3962129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3454004 |
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| End bp | 3455014 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637917935 |
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| Product | ABC transporter, substrate-binding protein |
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| Protein accession | YP_524356 |
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| Protein GI | 89901885 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.60563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGTA AATTCAATCC CAACCGTCTT TTTCAAGCAA TTGGACTTGC GTCCATCGTT
CTTGTTTCTT CCTCTGCCAT GGCGGCCGAC AAGGTGACCA TCATGGTCGG TGGCTATGAA
AAGCACATCT ATTTGCCGGC CAAACTGGCT GAAGGCTTGG GTTATTTCAA GGCCGAAGGG
CTGGACGTCG AGCTGCTGAA CGAAGGCTCC GGCGTGGATG CCGAAAACGA AATGCTGGCA
GGTGCTGTGC AAGGTGTCGT GGGCTTCTAC GACCATTGCG TCGATTTGCA GACCAAAGGC
AAATATGTTG AATCCGTGGT GCAGTTCAGC CAGGCCCCCG GTGAAGTTGA ACTGGTGTCC
ACCAAGCACC CTGAAATCAA GTCGGTGGCT GACTTGCGCG GCAAAAGCCT GGGCGTCACC
GGCTTGGGCT CTTCCACCAA TTTCCTGTCG CAATACCTGA TGGTCAAGGC TGGTGTTCCA
CTGGGCGAAT TTTCGACCAT TCCCGTGGGC GCTGGAACGA CCTTCATCGC AGCGATGACG
CAGGACAAGA TTCAGGCCGG CATGACCACC GAGCCCACCA TCTCGCGCCT GCTCAAGACC
GGCGAGGCAC GCGTTCTGGT GGATATGCGA TCCATAGAGA AGACCAAACA GGCGCTTGGT
GGAACCTACC CTGCGGCCTC GCTGTACATG CCCACCGATT GGGTCGAGAA GAACAAGCCG
ACGGTCCAGA AGCTGGCCAA CGCGTTTGTC AAGACACTGA AATACATCAA CACGCACAGC
GCTGCCGAGA TTGCCGACAA GATGCCCAAG GATTTCTATG CGGGTGATAA GGAGGGCTAT
ATCAAAGCTT TGGCGGACGG CAAGGCGATG TTCACCGCCG ATGGCGTGAT GCCAGCGGGA
GGTCCCGAAA CGGTTCTCTC CGTGTTGTCT GCGTTCTCGA AGAACGTCAA AGGCAAGACA
GTAGATTTGT CGAAGACCTA CACCACCGAG TTCGTGAAGA ACGCCAAGTA A
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| Protein sequence | MKSKFNPNRL FQAIGLASIV LVSSSAMAAD KVTIMVGGYE KHIYLPAKLA EGLGYFKAEG
LDVELLNEGS GVDAENEMLA GAVQGVVGFY DHCVDLQTKG KYVESVVQFS QAPGEVELVS
TKHPEIKSVA DLRGKSLGVT GLGSSTNFLS QYLMVKAGVP LGEFSTIPVG AGTTFIAAMT
QDKIQAGMTT EPTISRLLKT GEARVLVDMR SIEKTKQALG GTYPAASLYM PTDWVEKNKP
TVQKLANAFV KTLKYINTHS AAEIADKMPK DFYAGDKEGY IKALADGKAM FTADGVMPAG
GPETVLSVLS AFSKNVKGKT VDLSKTYTTE FVKNAK
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