Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3113 |
Symbol | |
ID | 3962126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3451333 |
End bp | 3451962 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637917932 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_524353 |
Protein GI | 89901882 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.050755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATGC TCACGACCCT CATCACCATC TGGATTCTCC ACGTCGCTGC CCTGGCCACA CCGGGCGCCA ATGTTTTGCT GGTGTCGCAG CTGGCGGCCA GTGACCGTGC CCAAAGTGCG GTGTTTGCGG CCTTGGGCGT GACGTTGGGC GCGTTCGTTT GGGCCAGCAG TGCGGTGCTG GGTGTGCACG CCCTCTTTCA GGCTTTCCCG GGTTTGCGCC TGGCCTTGCA GATTGCCGGC GGCGTCTACC TGCTGGTGGT GGCTGGTCGC TTGTGGCGCT CCGGCGCTGC GGCGCTCATC GAAAGCCGTG CATCGGTGTC TCGCCGCGCC GCATTTCGCC TTGGATTTTT GACCAACATC ACCAACCCAA AGTCCGCGCT GTTCTTCGGC AGCGTGTTTG CGGCTTCGTT TCCTGCAGCA CCCAGCCCGC TCCTGCAAAT GGCGGCGGTG GCCATGATCG TGACCAACGC ACTGAGCTGG CATATCCTGC TGGCCTACCT GTTCTCGCGC GCGCAGGTGC GTTCGGGTTA CTCGCGCGTG CGCGGCCTGG CCAATCGCAT GGCGGCCGCG GTGGTTGGCG TTTTGGGCCT GGGGCTTTTG GTGGCGACCT TGCGCGATGC CAGAGCGTAG
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Protein sequence | MEMLTTLITI WILHVAALAT PGANVLLVSQ LAASDRAQSA VFAALGVTLG AFVWASSAVL GVHALFQAFP GLRLALQIAG GVYLLVVAGR LWRSGAAALI ESRASVSRRA AFRLGFLTNI TNPKSALFFG SVFAASFPAA PSPLLQMAAV AMIVTNALSW HILLAYLFSR AQVRSGYSRV RGLANRMAAA VVGVLGLGLL VATLRDARA
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