Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3097 |
Symbol | |
ID | 3963293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3435400 |
End bp | 3436683 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637917917 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_524338 |
Protein GI | 89901867 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGAAT CGCTCGCTGA TCGCTTCGAC CTGGAAGGGT TCAGCCATGA TTGGCATCGT ACCGGCGCGG CCGCCCTGAC CGCCTTGCGC CTGAGAGACT ATGCCTTGGT CATCAGCGAC ATCCGCCTGC CCGACATGAC AGGCGATGTG CTGTTTGAAC AACTCCTGAC GGAACAACGC AGCCTGCCAC CGTTCATCTT CATAACCGGA CATGGCGACA TCGACACCGC CGTGCGCCTG CTCAAACGCG GCGCGCAGGA TTACATCACC AAGCCCTTCG ACCTTGATGC CTTGATTGAC AAGATTCACG GCATCGTCGC ACCGGAGGAT GCGTCAGGGA CCGGCAGCCT GGGGTGTTCG CCGGTCATGC GCCAGATCGA AGCCATGCTG CCTCGGTTGG CCGCGAGCGC CGCCTCGGTA CTGATCACCG GTGAATCCGG CGTTGGTAAG GAGCGTGTGG CGCAAGCGCT GCACCAGTTG ACCGGCGCCG ACAAGCCCTT TATTGCGGTC AACTGCGGCG CGCTGACCGA AAGCCTATTG GAAGCCGAAC TCTTTGGTTA CGAAAAAGGC GCTTTCACAG GTGCAGTCCG CACAAAAAAG GGCGTTTTCG AGCAGGCGCA TGGCGGCACA TTGTTACTTG ATGAAATAGG TGACATGCCT CTATCTATGC AGGTCAAGCT GCTACGCGCG CTGCAGGAGC GCTGCATCGT ACGGGTCGGT GGAGAAACCC CGATTCCAGT TGATATCCGC CTGGTCTGCG CCACGCATCA AGTGCTGCAG GAAGCGGTAA TCCGGGGCGA TTTTCGCGAA GACCTGTATT ACCGGATCAA TGTGGTCGAA CTGCGCATCC CGCCACTACG CGAACGCAGC GAGGACATTC TGCCGATTGC CCAGCACTTG CTGGCAGAGA TTGCCGACGC CAGTGGCAAG CCACCCCCCG GTCTGACGCC AGCAGCCGAA CATGCGATCA AGGCCTACCG CTGGCCCGGC AACATTCGGG AACTCAAAAA CACTCTGGAG CGCGCCAGCT TGATGAGCGA CGGCCGCTCG ATTTCGCATG ACATTCTGTT CGACCGCCCC GCGCCGCCAT TGAGCGGGCA GCTCGATATG GCGGGCAGCC TGCGCGACTA TTTGAATGAA TGCGAGCGTG ACTTTATCGT GCACGCACTC GACGGCTGCC AATGGCAGAT TCAATGCTGC GCGGACTCAT TGGGCATTAG CCGTAAAAAC CTGTGGGAGA AAATGCGCAA GCTGGAGATC GTCAAAGGCA GCGATGCGGA TTAG
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Protein sequence | MGESLADRFD LEGFSHDWHR TGAAALTALR LRDYALVISD IRLPDMTGDV LFEQLLTEQR SLPPFIFITG HGDIDTAVRL LKRGAQDYIT KPFDLDALID KIHGIVAPED ASGTGSLGCS PVMRQIEAML PRLAASAASV LITGESGVGK ERVAQALHQL TGADKPFIAV NCGALTESLL EAELFGYEKG AFTGAVRTKK GVFEQAHGGT LLLDEIGDMP LSMQVKLLRA LQERCIVRVG GETPIPVDIR LVCATHQVLQ EAVIRGDFRE DLYYRINVVE LRIPPLRERS EDILPIAQHL LAEIADASGK PPPGLTPAAE HAIKAYRWPG NIRELKNTLE RASLMSDGRS ISHDILFDRP APPLSGQLDM AGSLRDYLNE CERDFIVHAL DGCQWQIQCC ADSLGISRKN LWEKMRKLEI VKGSDAD
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