Gene Rfer_2983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2983 
Symbol 
ID3960614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3290508 
End bp3291332 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content60% 
IMG OID637917803 
Productexodeoxyribonuclease III 
Protein accessionYP_524225 
Protein GI89901754 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.385795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATGGG GGCTGCAGCC CCGTTTGACT CGGAAGATTC TTACGATGAA ATTCGCCACC 
TGGAACGTGA ACTCGCTGAC CGTGCGCTTG CCGCAGGTGC TGGACTGGCT CCAGGCCAAC
CCGGTCGATG TGCTGGCGCT GCAAGAACTC AAGCTGACCG ACGACAAGTT TCCTGTCGAT
GCTTTCAGGC AAGCCGGTTA CCACGCTGAA TGCTTCGGCC AGAAGACCTA CAACGGCGTC
GCGTTGCTCA GCCGGGAACC GGCACTCAAC GTGGTGCGCA ACGTCCCCGG CTTTGCCGAC
GACATGGCGC GCTCAATCAG TGCCGAGGTC AACGGTGTGC GTGTCATCGG TGCCTATTTC
CCCAATGGGC AGGAGCCGGG CTCCGACAAG TTTGAATACA AAATGGCCTG GCTCAAGGGC
TTGCGCGACT GGGTCCGCGG CGAATTGCTG ACGCACCCCA GACTGGTGCT GATGGGTGAC
TACAACATCA CCTTTGACGA TGCCGATGTG TGGGACCCGG TGGGCCTGAA AGACACGATT
CATTGCACCG AAGAGGAGCG TTACCACCTG CGCGCCCTGA TTGCGCTGGG TCTGCATGAC
AGTTTCCGCC TGTTCGCGCA GCCCGAGAAA AGCTACTCCT GGTGGGACTA CCGCGACTTC
GCCTTTCGAC GTAATCATGG CTTGCGCATC GACCACATTC TGGTCAGTGA TGCACTCAAA
CCGCTGGTGA CGGCTTGTGT GATTGACAAG GCGCCGCGCA AGAATGAACG CCCCAGCGAC
CACGCGCCGG TGGTGGTGAC GCTGGCGGAC ACCAACAAAG TCTAG
 
Protein sequence
MGWGLQPRLT RKILTMKFAT WNVNSLTVRL PQVLDWLQAN PVDVLALQEL KLTDDKFPVD 
AFRQAGYHAE CFGQKTYNGV ALLSREPALN VVRNVPGFAD DMARSISAEV NGVRVIGAYF
PNGQEPGSDK FEYKMAWLKG LRDWVRGELL THPRLVLMGD YNITFDDADV WDPVGLKDTI
HCTEEERYHL RALIALGLHD SFRLFAQPEK SYSWWDYRDF AFRRNHGLRI DHILVSDALK
PLVTACVIDK APRKNERPSD HAPVVVTLAD TNKV