Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2983 |
Symbol | |
ID | 3960614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3290508 |
End bp | 3291332 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637917803 |
Product | exodeoxyribonuclease III |
Protein accession | YP_524225 |
Protein GI | 89901754 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.385795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATGGG GGCTGCAGCC CCGTTTGACT CGGAAGATTC TTACGATGAA ATTCGCCACC TGGAACGTGA ACTCGCTGAC CGTGCGCTTG CCGCAGGTGC TGGACTGGCT CCAGGCCAAC CCGGTCGATG TGCTGGCGCT GCAAGAACTC AAGCTGACCG ACGACAAGTT TCCTGTCGAT GCTTTCAGGC AAGCCGGTTA CCACGCTGAA TGCTTCGGCC AGAAGACCTA CAACGGCGTC GCGTTGCTCA GCCGGGAACC GGCACTCAAC GTGGTGCGCA ACGTCCCCGG CTTTGCCGAC GACATGGCGC GCTCAATCAG TGCCGAGGTC AACGGTGTGC GTGTCATCGG TGCCTATTTC CCCAATGGGC AGGAGCCGGG CTCCGACAAG TTTGAATACA AAATGGCCTG GCTCAAGGGC TTGCGCGACT GGGTCCGCGG CGAATTGCTG ACGCACCCCA GACTGGTGCT GATGGGTGAC TACAACATCA CCTTTGACGA TGCCGATGTG TGGGACCCGG TGGGCCTGAA AGACACGATT CATTGCACCG AAGAGGAGCG TTACCACCTG CGCGCCCTGA TTGCGCTGGG TCTGCATGAC AGTTTCCGCC TGTTCGCGCA GCCCGAGAAA AGCTACTCCT GGTGGGACTA CCGCGACTTC GCCTTTCGAC GTAATCATGG CTTGCGCATC GACCACATTC TGGTCAGTGA TGCACTCAAA CCGCTGGTGA CGGCTTGTGT GATTGACAAG GCGCCGCGCA AGAATGAACG CCCCAGCGAC CACGCGCCGG TGGTGGTGAC GCTGGCGGAC ACCAACAAAG TCTAG
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Protein sequence | MGWGLQPRLT RKILTMKFAT WNVNSLTVRL PQVLDWLQAN PVDVLALQEL KLTDDKFPVD AFRQAGYHAE CFGQKTYNGV ALLSREPALN VVRNVPGFAD DMARSISAEV NGVRVIGAYF PNGQEPGSDK FEYKMAWLKG LRDWVRGELL THPRLVLMGD YNITFDDADV WDPVGLKDTI HCTEEERYHL RALIALGLHD SFRLFAQPEK SYSWWDYRDF AFRRNHGLRI DHILVSDALK PLVTACVIDK APRKNERPSD HAPVVVTLAD TNKV
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