| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2972 |
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| Symbol | |
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| ID | 3960603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3277891 |
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| End bp | 3279729 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637917792 |
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| Product | Poly-beta-hydroxybutyrate polymerase-like |
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| Protein accession | YP_524214 |
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| Protein GI | 89901743 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0719947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT CGATTCCACT CCCGCCGCCG ACTGAACGGC AGCTGGCTGC CGCCCAGGCG
CTTGATGAAG CGTTTCACTC ACAACTGGCC AAGGTCAACC TGGGTTTGTC ACCGATTTCC
CTGGCCCTGG CTTACGCCGA CTGGGCCATG CATCTGGCCA CGTCGCCAGG GCAACAGATG
CTGCTGGCAC AGCGGGCGCT GGCACTGTCG CAACAAGCAC TCAGCAGCCC TTGGCAGGAG
CAACTCGCGT CCGATGACGC GTCCCAGCCA GCGCCAGTCG ATGACCCGCG CTTCAGTGAT
CCGGGCTGGC GCCACTGGCC TTTCAATGTG CTCAAAGAAA GCTTCAAAGC CACCAGTTCC
TGGTGGCACG AGGCAAGCCA GGTCGAGGGG GTGTCGAGCC ATCACCGCCA TGTGGTTGAT
TTTTTTAACC GGCAGGGGCT CGATGCGCTG TCGCCCTCCA ACCTGCCCGT CACCAACCCC
GAAGCGATCA AGAAGGGCAA GGAATCACTG GGACAGAGCT GGCTCAAGGG CTACCAGCAT
TTGGCCCTGG ACCTGCTGGA GCGAAGCCAG CACACCGGTG GCGCGTCCCG CACCGCGCTC
AAACCGTTGC CATTCAAGGT CGGCCAGGAC GTCGCCGTCA CGCCGGGCAA GGTGGTGTTT
CGCAATCATC TGATTGAGCT GATCCAGTAC ACGCCAACGA CCGCTGGCGT CTACCCCGAG
CCACTGCTGA TTGTGCCGTC CTGCATCATG AAGTACTACA TCCTGGACTT GTCGCCCGGC
AATTCGATGG TGCGTTATCT GGTCGGGCAA GGGCACACCG TGTTCATGAT CTCGTGGCGC
AACCCGGATG CATCCGACCG CGAACTGGGT ATGCAGGACT ACCTGCAGCT AGGTGTGATG
GAGGCCATGG CGGCGGTGAA GTCGCTCACT GGCGCGCCCC GTATTCATGC CTTGGGCTAT
TGCCTGGGCG GGACTTTTCT GGCTATTGTG GCGGCGGCAC TGGGTGCTCG CCAGCCGCAG
TCGCACCGGC GCGGGCAAGG CAAAAATCAG CACCGTCGAC GGGAAGATGC GGTCGCGCTC
GACACCATGC CCGAGCTGGC CAGCGTGACG CTGCTGGCGG CGCAAACCGA CTTCAGCGAG
CCGGGCGAGC TGGGCGTTTT CATTGACGAC GATCAGCTCA AGACCCTGCG CGAGTCAATG
GCGCGCACCG GTTACCTCTC GGGCAGGCAG ATGGCCGGAT CGTTCCAGTT CTTGAATTCG
CGCGATCTGG TCTGGTCCCG CAATACGCGG CGCTACCTGT TGGGCCAGGA CGAGGTGGGC
AACGACATGA TGAGCTGGAA CGCCGACGTC ACACGTCTGC CCGAGCGCAT GCACAACGAG
TACCTGTCCT CGCTATTCCT CAATAACGCG CTGGCCACTG GCAACTACCG CGTGGCCGGG
GTCGGGGTCG CCCTGATGGA TATCCGTGCG CCGCTGCTGG TGGTGGGCAC CCAGCGCGAC
CACGTGTCGC CCTGGCAGTC GGTTTACAAG ATTCATCTGC TCACCGACAC CCAGACCACT
TTCATTCTGG CGGCAGGAGG CCACAACGCG GGCATTGTGT CCGAGCCCGG ACATCGAGGG
CGCAGTTACC AGATGGACTG CATGGAAAAA GGTCACGCCT GGACCGAACC TGATGACTGG
GCGGCGCATG CGCCTTTGTT CGAGGGTTCA TGGTGGGAGG CCATGCATCG CTGGTTGCAG
GAGCGCTCCG GCAAGCCGGT GCCGCCGCCC GCCATCAACC CGGCCACTGT GTTGGGCGAC
GCGCCTGGGG ACTACGTGAT GGCGCGCTAT GCCGACTGA
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| Protein sequence | MKKSIPLPPP TERQLAAAQA LDEAFHSQLA KVNLGLSPIS LALAYADWAM HLATSPGQQM
LLAQRALALS QQALSSPWQE QLASDDASQP APVDDPRFSD PGWRHWPFNV LKESFKATSS
WWHEASQVEG VSSHHRHVVD FFNRQGLDAL SPSNLPVTNP EAIKKGKESL GQSWLKGYQH
LALDLLERSQ HTGGASRTAL KPLPFKVGQD VAVTPGKVVF RNHLIELIQY TPTTAGVYPE
PLLIVPSCIM KYYILDLSPG NSMVRYLVGQ GHTVFMISWR NPDASDRELG MQDYLQLGVM
EAMAAVKSLT GAPRIHALGY CLGGTFLAIV AAALGARQPQ SHRRGQGKNQ HRRREDAVAL
DTMPELASVT LLAAQTDFSE PGELGVFIDD DQLKTLRESM ARTGYLSGRQ MAGSFQFLNS
RDLVWSRNTR RYLLGQDEVG NDMMSWNADV TRLPERMHNE YLSSLFLNNA LATGNYRVAG
VGVALMDIRA PLLVVGTQRD HVSPWQSVYK IHLLTDTQTT FILAAGGHNA GIVSEPGHRG
RSYQMDCMEK GHAWTEPDDW AAHAPLFEGS WWEAMHRWLQ ERSGKPVPPP AINPATVLGD
APGDYVMARY AD
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