| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2846 |
|---|
| Symbol | |
|---|
| ID | 3964008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 3144255 |
|---|
| End bp | 3145046 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637917665 |
|---|
| Product | alpha/beta hydrolase |
|---|
| Protein accession | YP_524088 |
|---|
| Protein GI | 89901617 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.455911 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTACG CCCAGGTCAA TGGCCAGAAC CTTTACTTCG AGGACAGCGG CGGCGCTGGC
CCGGCCCTCA TCTTTTCCCA TGGCTTGCTG ATGGACAGCA GCATGTTTGC ACCGCAGGTG
GCCGCGCTCA AGTCCCGCTA CCGCTGCATC GTGTGGGATG AGCGCGCACA CGGCCAAACC
GCCACCGGAG CCTGCGCCCC TTTCAGCTAC TACGACTCCG CGAATGACCT GGCCGCTTTG
CTGGCACATC TGGGTGTCGG GCAGGCCGTG CTGGTCGGCA TGTCACAAGG CGGCTACCTG
TCGCTGCGCT GCGCGCTGAC GCATCCGGAA ATCGTGCGTG CGCTGGTCCT GATCGACACG
CAGGCCAAGA CGGAAGACCC GGCCAAAATG CCCGCCTACC AAGCCATGCT CCAGGACTGG
GCCGTCAACG GCCTCTCGGA CCAGACCGCC ACGACCATCG AAACCGTCAT CCTGGGTGAG
CAGTGGCCGG GTGCAGCCGT GTGGCGCGAA AAATGGAAAA AGACCGCACC CGCCGATTTG
TTGCAGAGTT TTCAGACGCT GGGCACCCGC GATGACATCA GCGATCAGAT CGGGCGCATT
GCTGTTCCCA CGCTGGTACT CCACGGCGGC AGTGACCGTG CGATCGAGCT CCCGCGCGCC
AAGGCCATGG CCGATGCCAT GCCCAACGCC CGGCTCATCG TGGTGCCGGG AGCCGGACAC
GCCTCAAACC TCACCCACCC GCAAGCAGTC AATCCGGCGA TCGAGTCGTT TTTGGCCACC
CTCAAGCTTT AA
|
|---|
| Protein sequence | MPYAQVNGQN LYFEDSGGAG PALIFSHGLL MDSSMFAPQV AALKSRYRCI VWDERAHGQT
ATGACAPFSY YDSANDLAAL LAHLGVGQAV LVGMSQGGYL SLRCALTHPE IVRALVLIDT
QAKTEDPAKM PAYQAMLQDW AVNGLSDQTA TTIETVILGE QWPGAAVWRE KWKKTAPADL
LQSFQTLGTR DDISDQIGRI AVPTLVLHGG SDRAIELPRA KAMADAMPNA RLIVVPGAGH
ASNLTHPQAV NPAIESFLAT LKL
|
|---|
| |