Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2845 |
Symbol | |
ID | 3964007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3142616 |
End bp | 3144238 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637917664 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_524087 |
Protein GI | 89901616 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCAAC CCGGCCTCAT GATGGACCGC CCCCTTCTTA TTTCTGATGT CATCGAACAT GGCGCGGCCC AGTTTGGCGA CGTCGAGGTT GTCTCGCGTG AAACGCACGG ACCGCTGTTT CGCTACACCT ATGCCCAGTG CGCCGCGCGT TCGCGCAAAC TGGCCCATGC CCTCAAGAGT CTGGGACTGG AAGCCGGCAG CGCGGTCGGC TCCATCGCCT GGAACAACCA CCGCCATCTG GAGGCCTACT TTGCGGTCTC CGGCAGCGGC ATGGTGATGC ACACCTGCAA CCCGCGCCTG CAGGCCCAGC AGCTCATCTA CATCATCAAC CACGCCGAAG ACGCGGTGAT GTTGTTTGAC GCCACTTTTG CGCCCCTGGT CAAAGGGATC GCCGCGCACT GCCCCAAAGT CAAAGCCTGG GTTTGCCTGA GCGACGTGGC CAACATGGCA GCGGTTGAGG GGGTGAGCAA TGTGCTGTGC TACGAGGAGC TGATTGCCCC GCACAGCGAG CAGTTTGACT GGCCGCAATT TGACGAGCGC ACCGGCGCCG CCCTGTGCTA CACCTCGGGC ACCACCGGCA ACCCCAAGGG CGCGTTGTAC TCGCACCGCG CGATTGTGCT CAACGCCATG TCGGGCTGCC TGCCCGGCAT TCTGTCGCTC TCGCCCCGAG ACACGGTGCT GCCGGTGGTG CCCATGTTTC ACATCAATGC CTGGTGCATT CCCTACGCCG CGCCGATCGG CGGCTCGCGG CTGGTCTTGC CCGGCCCGCG TCTGGACGGC GCCAGCCTGT ATGAACTGAT GGAAACCGAG CGCGTGACGG TGAGCGCCGG TGTGCCCACC ATCTGGCTCG GTCTGATGCA GCATGTGGAG CAACACGGCC TGCGCTTTTC CAGCATGCGC CGCACGGCGG TGGGCGGCTC GGCCATGCCC GCGTCCTTGA TTGCCAAATT TGCCGACGAC TACGGCGTCG AGGTGCGCCA CGGCTGGGGC ATGACCGAGA CCACGGCCGC CACCACCATG AGTTGCCTGA CACCCAGGGA CCTGGAGCTG AGCCCGGCGC AGCAGCACGC GACAATAGCC CGCCAGGGCA AGTCGGTGTT TGGCGCCGAG ATCAAGATCG TGGATGAGGC CGGTGCCACC TTGCCGCGCG ACGGCGTGTC GCAAGGCGAA CTGATGGTGC GCGGACAGTG GATCGTGACC GGCTATTACA AGGGGGATCG CTCACCGCTG GTCGATGGCT GGTTCCCCAC TGGCGACATT GCCACCATCG ACGCCCACGG CGTCATGCAG ATCCGCGACC GCGCCAAAGA CGTGATCAAG ACCGGTGGCG AGTGGATCAG TTCGATTGAT CTGGAAAGCG CCGCGATGGG CCACCCGGCA GTGGCGATGG CGGCCGTCAT CGGCGTCAAA CACCCCAAGT GGGATGAACG CCCGTTGCTG TTCATCGTGC GCAAGCCGGG CAAGGCGGTG GAACGCGAAG AAATTCTGGC GTTTCTCACC GAGCGCGTGG CCAAGTGGTG GGTGCCGGAT GATGTCGTTT TTCTCGACGC ACTGCCGGTC GGCGGTACCG GCAAAGTGCA GAAGGGCGAT TTGCGCAAGC AGTACGGCGG CGTGTTCAGT TAA
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Protein sequence | MLQPGLMMDR PLLISDVIEH GAAQFGDVEV VSRETHGPLF RYTYAQCAAR SRKLAHALKS LGLEAGSAVG SIAWNNHRHL EAYFAVSGSG MVMHTCNPRL QAQQLIYIIN HAEDAVMLFD ATFAPLVKGI AAHCPKVKAW VCLSDVANMA AVEGVSNVLC YEELIAPHSE QFDWPQFDER TGAALCYTSG TTGNPKGALY SHRAIVLNAM SGCLPGILSL SPRDTVLPVV PMFHINAWCI PYAAPIGGSR LVLPGPRLDG ASLYELMETE RVTVSAGVPT IWLGLMQHVE QHGLRFSSMR RTAVGGSAMP ASLIAKFADD YGVEVRHGWG MTETTAATTM SCLTPRDLEL SPAQQHATIA RQGKSVFGAE IKIVDEAGAT LPRDGVSQGE LMVRGQWIVT GYYKGDRSPL VDGWFPTGDI ATIDAHGVMQ IRDRAKDVIK TGGEWISSID LESAAMGHPA VAMAAVIGVK HPKWDERPLL FIVRKPGKAV EREEILAFLT ERVAKWWVPD DVVFLDALPV GGTGKVQKGD LRKQYGGVFS
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