| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2748 |
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| Symbol | |
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| ID | 3963112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3033865 |
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| End bp | 3034887 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637917567 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_523992 |
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| Protein GI | 89901521 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.715028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTCA AGAAAATCGC GATCGGCATG GTCATGCTGG CCGCTTGCCT TACTACGTCC
GCTTTTGCAC AGTCGATCGA GAAATCAAAG GTCTCGATCG CGGTCGGCGG GAAAAATCTT
TTCTACTATC TGCCGCTGAC CATCGCTGAG CAACTCGGCT ATTTCAAGGA CGAAGGTCTG
GAGGTCGAGA TCAGCGATTT CGCCGGCGGT TCGAAAGCTC TGCAGGCGCT CATCGGTGGC
AGCGCTGATG TCGTCTCAGG CGCCTTCGAG CATACGATCA ACATGCAGGC CAAGGGCCAG
ATGATCACGG CTTTCGTGTT GCAGGGCCGG GCGCCGCAGA TCGTGTTCGG CGTCTCGAAC
AAGACCCTGC CGAACTACAA AAGCATCGCC GACTTGAAAG GCAAGAAGAT CGGCGTCTCC
GCACCCGGTT CGTCAACCAA CATCATGGCC AATTTCGTCC TGTCCAAGGG CGGCCTGAAG
CCGACTGATG TGTCCTTCAT CGGTGTGGGT ACCTCTGCCG GCGCTTTGTC GGCACTGCGT
TCCGGGCAAA TCGATGCGAT CTCGAACCTG GACCCGGTGA TCACCATGCT GCAGCAGAAA
AACGAGATCA GGGTGATTGC CGATACCCGC AAGCTCTCCG ACACCAATGC CTTCTTCGGC
GGACCGATGC CAGCCGGTAC CCTGTACGCG ACGGAGGCTT TCGTCAAGAA ATATCCGAAC
ACGACCCAGG CGCTCACAAA TGCCATGGTC CGAGCCCTCA AATGGCTGCA AACCGCAGGA
CCGTCGGATA TCGTCAAGGT GGTGCCGGAA AGTTTTCTGC TCGGTGACCG CGCTCTTTAT
CTTGATGCCT TCATGAACAT ACGCGGCGCA CTCTCACCGG ATGGCAGCTT CCCTGATGCA
GGCGCTGCAA CGGCCTTGCG CACGCTCACT GCGTTTGAGC CCGAGCTGGC GAACAAGAAA
ATCGACCTGT CAAAGACCTT CACGAACGAG TTCGTCAAAA AAGCCAACGC GAAATATCGA
TGA
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| Protein sequence | MNFKKIAIGM VMLAACLTTS AFAQSIEKSK VSIAVGGKNL FYYLPLTIAE QLGYFKDEGL
EVEISDFAGG SKALQALIGG SADVVSGAFE HTINMQAKGQ MITAFVLQGR APQIVFGVSN
KTLPNYKSIA DLKGKKIGVS APGSSTNIMA NFVLSKGGLK PTDVSFIGVG TSAGALSALR
SGQIDAISNL DPVITMLQQK NEIRVIADTR KLSDTNAFFG GPMPAGTLYA TEAFVKKYPN
TTQALTNAMV RALKWLQTAG PSDIVKVVPE SFLLGDRALY LDAFMNIRGA LSPDGSFPDA
GAATALRTLT AFEPELANKK IDLSKTFTNE FVKKANAKYR
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