| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2583 |
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| Symbol | |
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| ID | 3961991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2845274 |
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| End bp | 2846824 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637917402 |
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| Product | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha protein |
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| Protein accession | YP_523831 |
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| Protein GI | 89901360 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.604027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACCA TCCGCCAGAA TGACCTGATC GAGTCCATTG CCGCCGCCCT GCAATACATC
AGCTTCTACC ACCCGGCCGA CTACATCACG CACCTGGCGC GTGCTTATGA GCGTGAACAA
AGCCCGGCGG CCAAAGACGC CATTGCGCAA ATTCTGACCA ACAGCAAGAT GTCGGCAGAA
GGCCACCGCC CGATCTGCCA GGACACCGGC ATCGTCAACG TGTTCCTGAA AGTGGGCATG
GACGTGCGCT GGGGCGAGTT CACCGGCAGC CTCGACGACG CCATCAACGA AGGCGTGCGC
CGCGCCTACA CCAACCCCGA CAACCCGCTG CGCGCCAGTG TGGTGGCGGA CCCGCAGTTT
GAACGCAAGA ACACCAAAGA CAACACACCC GCGGTTATAT TCACCGAAAT CGTGCCCGGC
GACAAGCTCG AAGTTACGGT GGCCGCCAAG GGCGGTGGCA GTGAAAACAA AAGCAAGATG
TACATGCTCA ACCCCAATGA CTCGGTGGTC GATTGGGTGC TGAAGACCGT GCCCACCATG
GGCGCCGGCT GGTGCCCGCC CGGCATGCTG GGCATCGGCA TTGGCGGCAC GGCAGAAAAA
GCCGTGCTGA TGGCCAAAGA GAGCCTGATG GACAACCTGG ACATGCACGA ACTGCAGGCC
AAAGCCGCTG CTGGACAAAC ACTGACAAAA ACCGAAGCCT TGCGGATTGA ACTATTGGAC
AAGGTCAACG CGCTGGGCAT CGGCGCGCAG GGCCTGGGTG GCCTGACCAC CGTGCTGGAC
ATCAAGATCA AGATGTACCC CACCCACGCG GCAGGCAAAC CGATCGCCAT GATTCCGAAC
TGCGCCGCCA CACGGCACGC GCACTTTGTG ATGGACGGCA GCGGCCCGGT CTATTTGACA
CCCCCTTCGC TGGACACCTG GCCCGATGTG CAGTGGACGC CCGACTACGT CAAGAGCAAA
AAGGTCAATC TCAACACCTT GACCAAGGAA GAAGTGGCGA GCTGGAAACC CGGCGACACA
CTCTTGCTCA ACGGCAAGAT GCTGACTGGC CGCGACGCCG CCCACAAGCG CATCAAGGAC
ATGCTGGCCA AGGGCGAAAA GCTGCCGGTC GATTTCACCA ACCGCGTGAT TTACTACGTT
GGCCCGGTCG ACCCGATCAA GGGCGAAGCG GTCGGCCCGG CCGGCCCGAC CACCGCCACC
CGCATGGACG GGTTCACCGA GATGATGCTG GCTGAAACAG GCTTGATCGC CATGATCGGC
AAGGCCGAGC GCGGCCCGGT CGCCATTGAA GCCATCAAGA AACACAAGAG CGCCTATCTG
ATGGCCGTCG GCGGCGCCGC CTACCTGGTG TCCAAGGCGA TCAAGACCGC CAAGGTGGTG
GGCTTTGCCG ATCTCGGCAT GGAAGCCATT TATGAATTCG ACGTGGTGGA CATGCCGGTC
ACCGTGGCAG TCGATGCAGG CGGCACCAGC GCCCACATCA CCGGCCCGGC GGAATGGCAA
AAGCGCATTG CCAGCGGCGA ATTCAAGGGC ATCGAAGTCG CTAGCGCCTG A
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| Protein sequence | MSTIRQNDLI ESIAAALQYI SFYHPADYIT HLARAYEREQ SPAAKDAIAQ ILTNSKMSAE
GHRPICQDTG IVNVFLKVGM DVRWGEFTGS LDDAINEGVR RAYTNPDNPL RASVVADPQF
ERKNTKDNTP AVIFTEIVPG DKLEVTVAAK GGGSENKSKM YMLNPNDSVV DWVLKTVPTM
GAGWCPPGML GIGIGGTAEK AVLMAKESLM DNLDMHELQA KAAAGQTLTK TEALRIELLD
KVNALGIGAQ GLGGLTTVLD IKIKMYPTHA AGKPIAMIPN CAATRHAHFV MDGSGPVYLT
PPSLDTWPDV QWTPDYVKSK KVNLNTLTKE EVASWKPGDT LLLNGKMLTG RDAAHKRIKD
MLAKGEKLPV DFTNRVIYYV GPVDPIKGEA VGPAGPTTAT RMDGFTEMML AETGLIAMIG
KAERGPVAIE AIKKHKSAYL MAVGGAAYLV SKAIKTAKVV GFADLGMEAI YEFDVVDMPV
TVAVDAGGTS AHITGPAEWQ KRIASGEFKG IEVASA
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