| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2558 |
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| Symbol | |
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| ID | 3960888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2817932 |
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| End bp | 2818279 |
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| Gene Length | 348 bp |
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| Protein Length | 115 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637917377 |
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| Product | nitrite reductase (NAD(P)H) large subunit, NirD |
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| Protein accession | YP_523806 |
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| Protein GI | 89901335 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
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| TIGRFAM ID | [TIGR02378] nitrite reductase [NAD(P)H], small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.102904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACT GGAAAGAAAT CTGCCAAGTG ACTGACATTC CCGTATTGGG ATCGCGTTGC
GTCAAACGGC CGCAAGGCAC GGACGTGGCG GTGTTTCGCA ATGCGCAAGA CGAGGTGTTT
GCGCTGCTGG ACCGCTGCCC GCACAAAGGA GGTCCGCTGT CGCAAGGCAT TGTGTTTGGC
AGCAGCGTGG CCTGCCCCCT GCACAACTGG ACCATTGGCC TGGACAGTGG CTGTGCGCAC
GCGCCGGACA CGGGTTGTGT GCAGAGGTTT AGCGTCATGG TGGAGGGTGA TGCGGTGCAT
TTGGATTTGG ATGAGTTGGC GTCTGTGGCT GTGGGTGAGG TTGCATGA
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| Protein sequence | MSNWKEICQV TDIPVLGSRC VKRPQGTDVA VFRNAQDEVF ALLDRCPHKG GPLSQGIVFG
SSVACPLHNW TIGLDSGCAH APDTGCVQRF SVMVEGDAVH LDLDELASVA VGEVA
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