Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2545 |
Symbol | |
ID | 3960265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2805990 |
End bp | 2807060 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637917364 |
Product | lytic murein transglycosylase B |
Protein accession | YP_523793 |
Protein GI | 89901322 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.336249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCAAGA CAGCGCACAA GACGAGGCCC GCGAAGCGCG CCATCCGTCA CCGTCGCCTC GCCCGCCACC AGGCGGCCAG CAGGCAGCCC GCGCTGCCCG GACCCATCTA CGCGCAGCGC ACGGACGCCA TGCTGGCCGC CGATGACATC GCAGCACGCC GCGACCTGCC GCCTGACTGG GTGCGCCAGG CCATCGGCCA GGCCCACTAC TTGCCGCAAG TGGCCAGATT CATCCAGCCA CCGCCGCCGG GTACACCCAA AAACTGGCAG GTTTACCGCA GCCGCTTCAT CGACCCGGTG CGCATCAGGG CCGGGGTCCA GTTCTGGCAA GACAACCAGC AGATGCTGAC GCGTGCGCAA GAGCAGACCG GTGTGCCCGC CGAGATCATC GTCGGCATCC TCGGGGTGGA GACCATCTAT GGCCAGCAGA TGGGCAGCTT TCGGGTCATC GACGCTTTGA CGACACTGGC TTTTGATTTT CCCGCCAGCC ATCCCCGCGC GGCGGCCCGC AGCGAGTTCT TCAAGGCCGA GCTGGAACAG TTCTTGAGCC TGACCCACCG CACCGGCATG GACCCTTTGA TGCCCCTGGG CAGCTTTGCC GGGGCCATGG GCATGACGCA ATTCATGCCG TCGAGCTGGG TGAAGTACGC GATTGACTTT GACGGCGACG ACCGGGTGGA CCTGTTCAAC AGCGCGGCCG ACGCGATTGG TTCGGTCGCC AACTATTTCA AGGCCTTCAA CTGGCAAGCC GGCCTGCCGA CCCATTACGC TGTGCGTTTT GACAGCGCCA CTTTGAGCCT GCCGGCGCTG CTGGCACCCG ACATCCTGCC CACCTTCAGC GTCGAAAGCT TTGTGGCCCA CGGCGCCGTG CTTGAAGGCG CCGCATTGCA GCATCCGGGG AAGCTGGCAC TGGTGGAGTT GCAAAATGGC GATGCGCCCC CCAGCTATGT GGCCGGCACC GAAAATTTCT ATGCCATCAC GCGCTACAAC TGGAGCAGCT ACTATGCCAT GGCCGTGATT GAGCTGGGCC AGGAAGTGGC GCAAGAAATG GCACGCGCCC GCAATCCCTA G
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Protein sequence | MVKTAHKTRP AKRAIRHRRL ARHQAASRQP ALPGPIYAQR TDAMLAADDI AARRDLPPDW VRQAIGQAHY LPQVARFIQP PPPGTPKNWQ VYRSRFIDPV RIRAGVQFWQ DNQQMLTRAQ EQTGVPAEII VGILGVETIY GQQMGSFRVI DALTTLAFDF PASHPRAAAR SEFFKAELEQ FLSLTHRTGM DPLMPLGSFA GAMGMTQFMP SSWVKYAIDF DGDDRVDLFN SAADAIGSVA NYFKAFNWQA GLPTHYAVRF DSATLSLPAL LAPDILPTFS VESFVAHGAV LEGAALQHPG KLALVELQNG DAPPSYVAGT ENFYAITRYN WSSYYAMAVI ELGQEVAQEM ARARNP
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