Gene Rfer_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2428 
Symbol 
ID3961040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2677476 
End bp2677904 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content53% 
IMG OID637917246 
Productlarge conductance mechanosensitive channel protein 
Protein accessionYP_523676 
Protein GI89901205 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1970] Large-conductance mechanosensitive channel 
TIGRFAM ID[TIGR00220] large conductance mechanosensitive channel protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATTG CATCTGACTT CAAAGAGTTT GCCATGAAAG GCAATGTCGT CGACCTCGCG 
GTCGGTGTCA TCATTGGTGC CGCATTCGGC AAGATCGTCG ATTCGATCGT CAAAGATCTC
ATCATGCCGC TGGTCGGAAG GGTTGTGGGC GGTCTTGACT TTTCCAATTA CTTTTTTGTG
CTTTCTGACC CGCCAGCTGC GTTCAGGGGT CCGATGACCT ATGAGGCACT GACCAAGGCT
GGCGTTCCGG TCTTCGCCTA CGGAAACTTC ATCACGGTGG CTGTGAACTT CGTGATCCTG
GCTTTCATCA TCTTCATCAT GATCCGCCAG ATCAACCGCA TGAAGAAAGA GACGCCTGCT
GCACCACCAC CTTCGACGCC GGAAGACATC GTACTTTTGC GACAGATTCG CGACGCGCTC
TTGAAGTAG
 
Protein sequence
MSIASDFKEF AMKGNVVDLA VGVIIGAAFG KIVDSIVKDL IMPLVGRVVG GLDFSNYFFV 
LSDPPAAFRG PMTYEALTKA GVPVFAYGNF ITVAVNFVIL AFIIFIMIRQ INRMKKETPA
APPPSTPEDI VLLRQIRDAL LK