Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2428 |
Symbol | |
ID | 3961040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2677476 |
End bp | 2677904 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637917246 |
Product | large conductance mechanosensitive channel protein |
Protein accession | YP_523676 |
Protein GI | 89901205 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1970] Large-conductance mechanosensitive channel |
TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATTG CATCTGACTT CAAAGAGTTT GCCATGAAAG GCAATGTCGT CGACCTCGCG GTCGGTGTCA TCATTGGTGC CGCATTCGGC AAGATCGTCG ATTCGATCGT CAAAGATCTC ATCATGCCGC TGGTCGGAAG GGTTGTGGGC GGTCTTGACT TTTCCAATTA CTTTTTTGTG CTTTCTGACC CGCCAGCTGC GTTCAGGGGT CCGATGACCT ATGAGGCACT GACCAAGGCT GGCGTTCCGG TCTTCGCCTA CGGAAACTTC ATCACGGTGG CTGTGAACTT CGTGATCCTG GCTTTCATCA TCTTCATCAT GATCCGCCAG ATCAACCGCA TGAAGAAAGA GACGCCTGCT GCACCACCAC CTTCGACGCC GGAAGACATC GTACTTTTGC GACAGATTCG CGACGCGCTC TTGAAGTAG
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Protein sequence | MSIASDFKEF AMKGNVVDLA VGVIIGAAFG KIVDSIVKDL IMPLVGRVVG GLDFSNYFFV LSDPPAAFRG PMTYEALTKA GVPVFAYGNF ITVAVNFVIL AFIIFIMIRQ INRMKKETPA APPPSTPEDI VLLRQIRDAL LK
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