| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2400 |
|---|
| Symbol | |
|---|
| ID | 3962070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 2642854 |
|---|
| End bp | 2644269 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637917218 |
|---|
| Product | periplasmic sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_523648 |
|---|
| Protein GI | 89901177 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.314364 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTTC GTAGTCATTT GCTGCGCTGG CTGCTGATCC CCACGCTTGC ACTGTGGCTG
CTTGGGTCGG TGATCGGTTA CCTGCACAGC CTGGAGTTGG CACACGAGGC CTATGACCGT
ACGCTGCTTG GATCTGCAAT GGCTATCAGT GAACAAATCA CCGTTGTTGA TGGTGACGTG
GTGGCCGATG TTCCTTTTAC GGCACTGGAG ATGCTGCGTA CCGATGCTCA GGACCGCATC
TTTTACCGCG TGACCGATTT GGGCGACGGC GGTTACATCA CGGGCTACGA AGATCTGCCC
TCCGTGGGCA GTGGAAGCAG CGAAGAGCCC AGGTTTTATG ACACTATCTA CAAAGACCAA
GCCATCCGCG TTGTGGCCAT TGAAAGCACC GTGCTCGATG GCGATGCGCA ACGCCATCTG
CTGGTACAGG TGGCTGAGAC CCTGGACGCG CGGCACCAAC TCACCCGGAG CATCGCTGGT
GACGCGGCGC TGGTTCAACT TATCTTGATC GCCACGGCCG CCAGCATGAT TGCGCTAGGC
GTAGCTAGGG GACTGTCTCC CTTGACGCGG CTGCAGGATG AGGTTTTGAA ACGAACCGCC
CACGATCTCA CCCCGATTGA GACGGGCACC GTTCCCTTTG AGGTGGCGCC ACTCATCCAT
GCCATCAACG CCCACACCGA GCGGCAGCGC CAGTTCGGAG CGGCTCAGGT CCGCTTTGTT
GCCAACGCAT CGCACCAGTT GAAGACGCCG CTGACCGTGC TGCGTGCTCA GGTGGACCAT
GCCCTGCTGC AGACTGATCT GGCGTCGATG CGCGCCATTG TGAGCCATTT GCACGAAAGC
ACCGACGAGA CGGGGCGACT TCTTGCCCAA CTGCTCTCCC TGGCACGCAG CGAAGCCCAA
TACGCACGCG AGGTTCAAGA CCTGGATTTA ACCGATCTTG CTCACGAGGT GACCTTTGAG
ATGCTGACCC TGGCCCGCGG CAAAGGAATT GATCTCGGAT TCGAGGCTCC GTGCGCGGTG
CAGGTGCAGG GCGAGCGGGT GCTGTTGCGC GAGATGATTG CCAACCTGGT GCACAACGCC
CTGGTCTACA CACCAGAGGG AGGCCGAGTG ACCGTTTCGG TCGGCAGACA GGACGAGCGC
GCAGCATTAT GGGTTGTTGA TAACGGTCCG GGTATTGCAG TCGCCGAGCG ACCTCGCGTG
CTGGAGCGGT TCTATCGCAT CGCCGGATCC CGGGAGCACG GCAGCGGACT CGGCCTGGCG
ATCGTGCGTG AAATCTGTGA TCGCCATGGC ATCGTAATGG AACTGGGCGA CGCGCTGGAC
AGCGTGAGCG GACTTCGTGT CCAATTGGTG TGGCCCGGCG AAGTGTCTGA CAATGAACGC
GGCTACATCT CGAAGGCAAA TCATTTCAAT GCATGA
|
|---|
| Protein sequence | MRLRSHLLRW LLIPTLALWL LGSVIGYLHS LELAHEAYDR TLLGSAMAIS EQITVVDGDV
VADVPFTALE MLRTDAQDRI FYRVTDLGDG GYITGYEDLP SVGSGSSEEP RFYDTIYKDQ
AIRVVAIEST VLDGDAQRHL LVQVAETLDA RHQLTRSIAG DAALVQLILI ATAASMIALG
VARGLSPLTR LQDEVLKRTA HDLTPIETGT VPFEVAPLIH AINAHTERQR QFGAAQVRFV
ANASHQLKTP LTVLRAQVDH ALLQTDLASM RAIVSHLHES TDETGRLLAQ LLSLARSEAQ
YAREVQDLDL TDLAHEVTFE MLTLARGKGI DLGFEAPCAV QVQGERVLLR EMIANLVHNA
LVYTPEGGRV TVSVGRQDER AALWVVDNGP GIAVAERPRV LERFYRIAGS REHGSGLGLA
IVREICDRHG IVMELGDALD SVSGLRVQLV WPGEVSDNER GYISKANHFN A
|
|---|
| |