Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2381 |
Symbol | aroD |
ID | 3962832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2621411 |
End bp | 2622205 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637917199 |
Product | 3-dehydroquinate dehydratase |
Protein accession | YP_523629 |
Protein GI | 89901158 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0710] 3-dehydroquinate dehydratase |
TIGRFAM ID | [TIGR01093] 3-dehydroquinate dehydratase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.588803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAATCAT CCAAACCCAT TGAATCACAT GGTCAGCCCA TCGCGGGCGG CAAGCTGCCG CTGATCTGCG TCCCGCTGGT CGGGCACACA CTGGACGAGG TGATGGCTGA GCTTGCCATT GTTCTGCCCA AGAAGCCTGA TGTGCTGGAA TGGCGGGTTG ATTTTTTTGA GTCAATTGGT GACGTAGCTG CAGTCATCGC AGCGGCCAAA GCCATAAAAA GCAAAGCGGG TGATATTCCG TTGCTATTCA CCCGCCGCTC GGTCATGGAG GGCGGTGAAA AGATCGCTTT GAACGAAGAC CAAGTCATTG CCCTGTATGG GGCGGTGTGT GAGAGCAAAG CCATTGATTT GATCGACTAC GAGATGGCCA ATGAAACGGC CAACATCGCG CAGGTGCGCG CGGCGGCCAA GTCCAACGAC ATCAAGCTGG TGCTGTCTTT TCACAATTTT TCGAGCACAC CGGGACTGGA AGCGCTGGCG AGCAAGTTTT TGATGGCCGA CCAGCTGGGT GCCGATATTG CCAAAGTGGC TGTGATGCCG CGGGATCCAA ACGATGTGCT GATACTGCTT GCTGCCACGC AGCAAGCCAG TCAGAAATTG AGAATCCCAC TCATCAGCAT GTCAATGGGG CCCTATGGTT CGCTTACCCG TCTGTTTGGC TGGGCCTTTG GATCGGCCCT GACCTTTGCC GTAGGGGCTC GCAGTTCAGC GCCCGGCCAG GTGCCGATTG AAGACTTGAA CACCGTGCTT GGCATCTTGC GCAAGGCCAT GGGAGACGGG CAGACCACTC CATAG
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Protein sequence | MQSSKPIESH GQPIAGGKLP LICVPLVGHT LDEVMAELAI VLPKKPDVLE WRVDFFESIG DVAAVIAAAK AIKSKAGDIP LLFTRRSVME GGEKIALNED QVIALYGAVC ESKAIDLIDY EMANETANIA QVRAAAKSND IKLVLSFHNF SSTPGLEALA SKFLMADQLG ADIAKVAVMP RDPNDVLILL AATQQASQKL RIPLISMSMG PYGSLTRLFG WAFGSALTFA VGARSSAPGQ VPIEDLNTVL GILRKAMGDG QTTP
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