Gene Rfer_2304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2304 
Symbol 
ID3964106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2527198 
End bp2528337 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content61% 
IMG OID637917121 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_523553 
Protein GI89901082 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID[TIGR03300] outer membrane assembly lipoprotein YfgL 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.262022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCTTG TCAATTTATT AACTGCAGCC ACAAAGGTCG CTTTTGGCCT GGTCGTCGTG 
AGTTCCCTCA TCAGTTGTTC AAGTACGCCA GACAAACCCA AACCAGTCGA GTTGGCGCCC
AACGCGGGTC TGCTGGGTGT GCGTTTGGCG TGGACAGCGA AAGTGGGGGC CGTCGACTTC
CCGCTGGATG TCAAAGTTAA CGATAGCACG GTGGCGGTGG CCAGTTCAGA TGGCATTGTG
GCCATGTTGG ACGCGCGCAC GGGTGCGGAG CGATGGCGTG CCAGTGTTGG TGGCCAGATT
GCAGCGGGCG TGGGAAGCGA TGGCAGATTT GCCGCCGTGG TAACGCGTGG CAATGAGTTG
ATTACCTTGG ATGGTGGACG CGAGATTTGG CGTCAAAAAC TACCGGCCCA AGGCTTTACG
GCCCCGCTGG TGGCGGGTGG GCGCGTTTTT GTGCTGGCCG CTGATCGGTC GGTCACTGCT
TTTGATGGTC TTTCGGGGCG CAAACTCTGG ACACAGCAGC GTCCCGGAGA GTCCTTGGTG
CTGCGTCAGG CGGGCGTCTT GCTGGCCGTT GGCGATACGC TGGTGGCCGG CTTATCTGGA
CGACTCGTCG GCATCAACCC ATCCAACGGT GCCATTCAGT GGGAGTCCCC CATTGCCTCG
CCACGTGGCA CCAACGATAT CGAGCGGCTG GTGGATCTGG TTGGACGTGT CAGCCGTGAG
GGTGATGTGG TGTGCGCCCG CGCCTTCCAG GCGACTGTTG GGTGTGTCAA TGCAGCCCGT
GGCACCTTGC TTTGGACCAA GCCTGCGTTT GGCTACACGG GTGTTCATGG TGATGACAAG
TATGTTTATG GCGTCGAGAG TGACGGGAAC ATCATGGCTT GGCGACGTAT CGACGGTGAG
CGCGCCTGGG TGTCTGAGCG TCTGCGCTAC CGCAGTCTGA CCGCCCCGTT GGTTGTGGGG
CGTTCAATCG CGGTGGGCGA TGATGCGGGC CTCGTTCATT TGCTCTCGCG TGAAGACGGA
TCTGCCCTGA CGCGCGTCGC AACCGATGGC TCGGCGGTGG TTGCCGCACC GGTGTTGGCT
ATGGGCACGC TGGTGGTCGT CACGCGCAGC GGTGGCGTTT TCGGATTTGT GCCTGAGTAA
 
Protein sequence
MKLVNLLTAA TKVAFGLVVV SSLISCSSTP DKPKPVELAP NAGLLGVRLA WTAKVGAVDF 
PLDVKVNDST VAVASSDGIV AMLDARTGAE RWRASVGGQI AAGVGSDGRF AAVVTRGNEL
ITLDGGREIW RQKLPAQGFT APLVAGGRVF VLAADRSVTA FDGLSGRKLW TQQRPGESLV
LRQAGVLLAV GDTLVAGLSG RLVGINPSNG AIQWESPIAS PRGTNDIERL VDLVGRVSRE
GDVVCARAFQ ATVGCVNAAR GTLLWTKPAF GYTGVHGDDK YVYGVESDGN IMAWRRIDGE
RAWVSERLRY RSLTAPLVVG RSIAVGDDAG LVHLLSREDG SALTRVATDG SAVVAAPVLA
MGTLVVVTRS GGVFGFVPE