| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2287 |
|---|
| Symbol | guaA |
|---|
| ID | 3963329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 2510652 |
|---|
| End bp | 2512262 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637917104 |
|---|
| Product | GMP synthase |
|---|
| Protein accession | YP_523536 |
|---|
| Protein GI | 89901065 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain
[COG0519] GMP synthase, PP-ATPase domain/subunit |
|---|
| TIGRFAM ID | [TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.144923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCAAA AAATTCTCAT TCTTGACTTT GGCTCCCAGG TCACCCAGTT GATTGCGCGG
CGCATCCGCG AGGCGCATGT GTTTTGCGAA GTGCATCCCT GTGATGTGAC TGATGACTGG
GTGCGTGCCT ATGCCCGGGA TGGCAAGCTC AAAGGCGTGA TCCTGTCGGG CAGCCATGCC
AGCGTCTATG AAGAGACGAC CGACAAGGCG CCGCCTGCGG TGTTTGAACT GGGTGTGCCG
GTGCTGGGCA TTTGTTATGG CATGCAGACC ATGGCGCACC AGTTGGGCGG CATCGTCACC
AGCGGGCACC AGCGCGAGTT TGGCCCCGCC GATGTGCGCG CCCATGGCCA TACCGCCTTG
CTTGAAGGTA TTCAGGACTA CAAGACGGCC GCGGGCCACG GCATGCTGCA GGTCTGGATG
AGTCATGGCG ACAAGGTCAC CGAGTTGCCG CATGGCTTCA AGCTGATGGC CAGCACCGAC
AGTTGCCCGA TCGCCGGCAT GGCCGATGAA ACGCGGCGTT TTTATGGTGT GCAGTTTCAC
CCTGAGGTGA CGCACACCAA GCGCGGTGCG GCGATTCTGG AGCGCTTTGT GCTCGATATT
TGTGGCGCAC GGGCTGACTG GATCATGGGC GATTACATCA GCGAGGCGGT GGAGCAAATC
CGCGCCCAGG TCGGCACCGA CGAGGTCATT TTGGGCCTCT CCGGTGGGGT CGATTCGTCG
GTCGCTGCGG CCCTGATCCA CCGGGCCATT GGTGAGCAAC TCACCTGCGT GTTTGTGGAC
CACGGCCTGC TGCGTCTCAA CGAGGGCGAC CTGGTGATGG AAATGTTTGT CGGCAAGCTG
CACGCCAAGG TGATTCGGGT TGATGCTGCT GACCAGTTCC TCGGACAGCT CGCGGGCGTG
AGCGACCCGG AGGCCAAACG CAAAATTATT GGCCGCGAGT TTGTCGAAGT GTTCAAGGCC
GAGGCTGCCA AGCTCAAAAG CGACCAGTCG CGCCACGTCG CCTGGCTGGC CCAGGGCACG
ATTTACCCCG ACGTGATCGA ATCCGGCGGC GCCAAGAACA AAAAAGCGGT GGTCATCAAA
AGCCACCATA ACGTGGGCGG CTTGCCGGAG CTATTGGGCC TAAAGCTGCT GGAACCCCTG
CGCGAATTGT TCAAGGATGA AGTACGCGAG CTCGGCGTGG CGCTTGGTTT GCCCTATCAC
ATGGTGTACC GGCATCCGTT TCCCGGTCCC GGTCTGGGGG TGCGGATTCT GGGCGAAGTC
AAAAAGGACT ACGCAGATTT GCTGCGCCGT GCCGATGCCA TCTTTATCGA CGAACTGCAC
AACTTCATCG ACGAGGCATC AGGCAAGAGC TGGTACGACC TCACCAGTCA GGCCTTCGCG
GTGTTTTTGC CCGTCAAGAG TGTCGGCGTC ATGGGCGACG GCCGCACCTA CGACTACGTG
GTCGCCTTGC GTGCCGTGCA AACCAGTGAC TTCATGACCG CCGATTGGGC CGAGTTGCCT
TATGCGCTGC TGAAAAAAGT GTCGAGCCGC ATCATCAACG AAGTGCGCGG CATCAACCGG
GTCACATACG ACGTGTCAAG CAAGCCGCCG GCCACCATTG AGTGGGAGTA G
|
|---|
| Protein sequence | MHQKILILDF GSQVTQLIAR RIREAHVFCE VHPCDVTDDW VRAYARDGKL KGVILSGSHA
SVYEETTDKA PPAVFELGVP VLGICYGMQT MAHQLGGIVT SGHQREFGPA DVRAHGHTAL
LEGIQDYKTA AGHGMLQVWM SHGDKVTELP HGFKLMASTD SCPIAGMADE TRRFYGVQFH
PEVTHTKRGA AILERFVLDI CGARADWIMG DYISEAVEQI RAQVGTDEVI LGLSGGVDSS
VAAALIHRAI GEQLTCVFVD HGLLRLNEGD LVMEMFVGKL HAKVIRVDAA DQFLGQLAGV
SDPEAKRKII GREFVEVFKA EAAKLKSDQS RHVAWLAQGT IYPDVIESGG AKNKKAVVIK
SHHNVGGLPE LLGLKLLEPL RELFKDEVRE LGVALGLPYH MVYRHPFPGP GLGVRILGEV
KKDYADLLRR ADAIFIDELH NFIDEASGKS WYDLTSQAFA VFLPVKSVGV MGDGRTYDYV
VALRAVQTSD FMTADWAELP YALLKKVSSR IINEVRGINR VTYDVSSKPP ATIEWE
|
|---|
| |