Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2277 |
Symbol | |
ID | 3963319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2498228 |
End bp | 2499688 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637917097 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_523529 |
Protein GI | 89901058 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCTACC ACTGGAGTGA TGCTGTGTTC CCAAGAAAGA ACCTAATCGA GCTCGACCGC CCCCAAAATC TGAGCCGACT GTCTCAAAGT CACTGGATGA AGGAGGCCGA GCCGCTGGAG CCCTCCACCC GCCCGCTCAA CGGGAAAAAA TTCGCCGACG TGGCTATCAT TGGCGGCGGC TATGTCGGGT TGTGGACGGC CCTGACCATC AAGGCGGAAC ACCCCGAGGC ACGTGTGGTC GTGCTGGAGC GGGACATTTG CGGGGGCGGC GCTTCAGGGC GCAATGGCGG ATTCGCCATG TCGTGGTGGC CGAAGATTTC TACCTTGATG GGTATCGCCG ACAAGGACGA GGCCATCCGC CTGGCCGTTG CATCCGAGCA GGCGATTTCT GAATTGGGGC AGTTCTGCCA GGACAACGGC ATCGACGCTC ATTTCGTTCA GGGGGGATGG CTGTGGACGG CCACCTCCGA ATTCCAGCGA GATGCCTGGC GCGATACGCT CCATGCGTGC GCGAAGATTG GGAAAAGACC GTTCCAGAAC CTCTCTGATG AAGATGTTTC CCGTCGCACG GGATCCAGGG TGCACCTGGC CGGTGTCTAC GAGCAGAGCA ATGCGACCGT TCAGCCTGCG TTTCTGGCGC GCGGGCTGCG CAAGGTTGCC CTCCAACGCG GTGTGGAAAT CTACGAGAAC ACGGCGGTCG TCTCGTTGTC GACCAACGCA CCGTCGATCC TCATGACCGC TCACGGCGAG GTTCAGGCTC AGGCCGTTGT GCTGGCAAAC AATGCCTGGG CCGCCGCCAT ACCGGAGCTA GGGCAACTCA TCACACCCGT CAACAGCACT ATCATCGCCA CTGAGCCCGT GCCGGAACGG CTTCGAGAGA TCGGCTGGAC GGGCGGCGAA TCCATCACCG ACTCTCAGCT CATGGTGGGC TATTACAGGA CCACGCGCGA CGGACGAATC GTCTACGGCA AGGGCACAGG CGTCATCCAG TATCAGAGCG TGATTGGCGA ATGCTTCAGC CAGTCTCCAG AGGCGACAGC GCTCACGCTG GCTGATTTCC GGCGCTCCTT TCCCATGCTG CGGGACGTGA AGATCGACGA CCAATGGGCT GGCCCGATCG ACCGGACCTA TGACAGTCTG CCGGTGTTCG GAACCCTGAG GGATGCCGGC CACATCAGCT ACGGCGTCGG CTGGAGCGGC AACGGTGTGG CTCCCAGCCG CATCGGCGGA AAAATACTGT CCGCCTTGGC GCTTGGTTTG CGCAACGAAT GGTCTGGATG CGCCTTGGTC AACCGATCCA GTCGGAAATT CCCGCCCGAA CCCTTCAGGT TTGTCGGCGG TTCGCTAGTC AGGAACGCCG TACTGCGCAA AGAACAAACC GAAGCACTTG GCAAGATGCC GCACTGGTGG GATGTGAAGT TCGCCGGCCT CGCGCCGGCG GGCCTCGAAG ACAAATCCTA A
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Protein sequence | MGYHWSDAVF PRKNLIELDR PQNLSRLSQS HWMKEAEPLE PSTRPLNGKK FADVAIIGGG YVGLWTALTI KAEHPEARVV VLERDICGGG ASGRNGGFAM SWWPKISTLM GIADKDEAIR LAVASEQAIS ELGQFCQDNG IDAHFVQGGW LWTATSEFQR DAWRDTLHAC AKIGKRPFQN LSDEDVSRRT GSRVHLAGVY EQSNATVQPA FLARGLRKVA LQRGVEIYEN TAVVSLSTNA PSILMTAHGE VQAQAVVLAN NAWAAAIPEL GQLITPVNST IIATEPVPER LREIGWTGGE SITDSQLMVG YYRTTRDGRI VYGKGTGVIQ YQSVIGECFS QSPEATALTL ADFRRSFPML RDVKIDDQWA GPIDRTYDSL PVFGTLRDAG HISYGVGWSG NGVAPSRIGG KILSALALGL RNEWSGCALV NRSSRKFPPE PFRFVGGSLV RNAVLRKEQT EALGKMPHWW DVKFAGLAPA GLEDKS
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