Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2261 |
Symbol | |
ID | 3960816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2473778 |
End bp | 2474839 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637917082 |
Product | phage integrase |
Protein accession | YP_523514 |
Protein GI | 89901043 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.245925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCTGC CCGTCCTGCA AAAAGTCCCT GCCCTGCAGC CCGCAGAACT CAGCGAGCTC ACTCAGCATG CCGTCGAGGA CCTGCTGCGC GAAGGCGAGT CACAAAACAC CCTGGCCAGC TACCGTAGCG CTTTGCGCTA CTGGGCGGCC TGGTATGGGA TTCGATACGG CCGTCAGATT GACTTACCGG TGCCGACCGC TTGCGTGCTG CAGTTCATCG TCGACCATGC TCAGCGCACT ACCGACAAAG GACTCGTGTC GGAACTGCCG GCCGAGATTG ACCAGGCCTT GGTCCAGGCC GGCTACAAAG GCAAGCCCGG CGCTTTGGCG CACAACACGC TGGTGCACCG GATCGCGGTG TTGTCCAAGG CCCACCAGAT GCGCGAGTTC AAGAATCCCT GCCACGACCC CAAGGTGCGC GAGCTGCTGT CACGCACCCG CAAGGCCTAC GCCAAGCGCG GCGCCCTGCC CCAGAAAAAG GATGCGCTGA CGAAAGATCC GCTGCAGGCG ATCCTGGCCA CCTGCGACGA CTCGCTGCGC GGCAAGCGCG ACCGTGCCCT GCTCCTCTTT GCCTGGTCCA GTGGCGGGCG CAGACGTTCC GAAGTGGCGG GCGCGGACAT GCAGTTTTTG AAACGGGTGG GGCCGACCGC CTTCATCTTC ACCCTCGCCC ACTCCAAGAC CAATCAGGCT GGAACAGACC AGCCGGAAAA TGGCAAGCCG GTACTGGGCG CTGCGGGGAC GGCACTTAAC GATTGGCTCC AGGCCGGTCC AATCACATCA GGCGCGATTT TTAGGAGAAT TCGCAAGGGC GGGCATCTCG GTGACGCCCT CTCCCCCGCT GCCGTGCGCA CCATCGTCAA GGACCGCTGT GCGTTGGCGG GAATTGAAGG GGATTTTTCT GCGCATTCGT TGCGATCAGG CTTTGTGACG GAGGCCGGCC GCCAGAACGT GCCACTGGCG GAAACGATGG CGATGACGGG GCATCACAGT TTGGCGACGG TGTTGGGGTA TTTCCGATCT GAGAGCGCTT TGTCGAGTGC AGCCGCCCGG CTATACGAAT AA
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Protein sequence | MRLPVLQKVP ALQPAELSEL TQHAVEDLLR EGESQNTLAS YRSALRYWAA WYGIRYGRQI DLPVPTACVL QFIVDHAQRT TDKGLVSELP AEIDQALVQA GYKGKPGALA HNTLVHRIAV LSKAHQMREF KNPCHDPKVR ELLSRTRKAY AKRGALPQKK DALTKDPLQA ILATCDDSLR GKRDRALLLF AWSSGGRRRS EVAGADMQFL KRVGPTAFIF TLAHSKTNQA GTDQPENGKP VLGAAGTALN DWLQAGPITS GAIFRRIRKG GHLGDALSPA AVRTIVKDRC ALAGIEGDFS AHSLRSGFVT EAGRQNVPLA ETMAMTGHHS LATVLGYFRS ESALSSAAAR LYE
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