| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2232 |
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| Symbol | |
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| ID | 3961963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2447502 |
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| End bp | 2448272 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637917051 |
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| Product | RNA methyltransferase TrmH, group 3 |
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| Protein accession | YP_523485 |
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| Protein GI | 89901014 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTTCAC CCAAAGTTTT ATTCGGCTTT CATGCCGTCG GGGTTCGCCT CAAAACCGCA
CCCCAGTCCA TCATCGAGAT TTATTTCGAA CCGACGCGCC GTGATGCGCG CATGCGCCAG
TTTCTGGACA AGGCCAATGA GGCCGGAGCG CGCTTGATCG AGGCCGATGG CATTCGTCTG
GCCAAGCTCT GCGGTGGTCA CGGCCACCAG GGCGTGGCGG CGCGGGTGCA CGAGCTGGCA
CAAGTGAAAT CGCTGGATGA ATTGCTGGAG CAGCTCGAAG CGGCGCAGAC CGACAGACCC
CCCACCGAGC GGGAAGAAGC ATTGATCCTG GTGCTTGATG GTGTGACCGA TCCACACAAC
CTAGGTGCTT GCCTGCGCGT GGCCGATGGC GCCGGTGTGC ACGCCGTGAT CGCTCCCAAA
GACCACGCCG CTGGCATCAA CGCCACAGTG GCCAAGGTCG CCAGTGGCGC GGCTGAGACC
GTGCCCTACT TCATGGTGAC CAACCTGGCG CGTACCCTGA ATGAACTCAA GGAACGCAAT
ATCTGGATCA TCGGCACCAG CGACGTGGCA CCTAAAACCA TTTACCAGGC CGACCTCAAA
GGGCCGGTGG CGCTCGTGCT GGGGGCCGAG GGCGATGGCA TGCGCGCGCT GACCGCCAAG
ACCTGTGATG AGTTGGTCAG CATCCCGATG CGCGGGGCTG TTGAAAGCCT CAATGTGTCG
GTGGCCAGTG GTGTGTGTTT GTACGAGGCA TTACGCCAGC GAATGGGCTG A
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| Protein sequence | MSSPKVLFGF HAVGVRLKTA PQSIIEIYFE PTRRDARMRQ FLDKANEAGA RLIEADGIRL
AKLCGGHGHQ GVAARVHELA QVKSLDELLE QLEAAQTDRP PTEREEALIL VLDGVTDPHN
LGACLRVADG AGVHAVIAPK DHAAGINATV AKVASGAAET VPYFMVTNLA RTLNELKERN
IWIIGTSDVA PKTIYQADLK GPVALVLGAE GDGMRALTAK TCDELVSIPM RGAVESLNVS
VASGVCLYEA LRQRMG
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