Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2203 |
Symbol | |
ID | 3963150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2408035 |
End bp | 2409912 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637917024 |
Product | DNA primase |
Protein accession | YP_523458 |
Protein GI | 89900987 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.198077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATTC CCCAGACCTT TATTCAGGAG TTGCTCGCAC GCGCCGACGT GGTGGAGATC GTGGGCCGTT ATGTGCAGCT TAAAAAGGGC GGCGCCAACT TCATGGGCCT GTGCCCGTTT CACGGGGAAA AGTCGCCCTC CTTCTCGGTC AGCCCGAGCA AGCAGTTTTA TCACTGCTTT GGCTGTGGCA AAAACGGCGA TGCCATCAGT TTCTTGATGG AGCACGCGGG CATGACCTTT GTGGAGGCGG TGCAAGACCT GGCCCAGCAA TATGGTCTGC AAGTGCCTGA GGACGACGCC AGCCCGCAGG ACCGGGCGCG CGCGCTTGAG CAGCGGCAAA AGCAGACTAC CTTGACCGAC GTGCTCGAAA GAGCAAACGA TGCCTACAGA AAGCAGCTGA AAGAGTCCCC GCGCGCCGTG GACTACCTCA AGGGTCGCGG CGTCTCAGGT GAAATTGCCA AACAGTTTGG TTTGGGTTAC GCGCCCGAGG GCTGGCGCAG TCTGGCCAGC GTTTTCCCCA GCTATGACGA TCCACTGCTG GTCGAAAGCG GTCTGGTGAT CCTGAATGTT GACGAGAATT CGGGTGAAGA AAAGCGCTAC GACCGTTTTC GCGACCGGGT CATGTTCCCG ATCCGCAACG TCAAGGGCGA ATGTATTGGT TTTGGTGGCC GGGTGCTGGG CGACGACAAA CCCAAATACC TCAACTCACC GGAAACCCCT GTTTTCAGCA AGGGACGTGA ACTGTACGGC CTGTTTGAAG CCCGCAACGC GCTGCACGAG CAGGGCTACG CGCTGGTGAC CGAAGGTTAC ATGGATGTGG TGGCGCTGGC CCAACTCGGT TTCTCCAATG CCGTGGCCAC GCTGGGCACC GCCTGCACGG CAGAACATCT GCACAAGCTG TTTCGCTTCA CCGATGCCGT GGTGTTCAGT TTCGATGGCG ACGCGGCCGG CCGACGTGCC GCGCGCAAGG CACTCGATGG CGCCCTGCCC TTTGCCACCG ATGTGCGCAG CGTCAAGTTC CTGTTCTTGC CGCCTGAACA CGACCCCGAC AGCTTCATCC GGGAATTTGG CAAGGAAGCC TTCGCCCGCT ATGTGAGCGA AGCCGTCCCC TTGAGCCGCT TTTTGATTGA CGCGGCGCGC GAAGGCTGCG ACCTGAACAC GGCTGAAGGC CGCGCCCACT TCGCCAGCAA TGCCAAACCG CTGTGGCTGC TGCTGCCCGA TGGTGCCCTG AAGCTGCAGT TGCTGAGCGA AATTGCCGAC CTGGTGCAGT TGTCGAGTCG TGAATTGACC GAAGTGTGGA ACCCATCAGC CGCAGGCAAA GGCAATGCAA AATCAAAAAC CTATGAAAAA CATAGCGCAT CACCCAATGA ATACGGGGGC TACAGCCAGA AATCATCTAT AAAACCGCCA CCACGTCCGC GTCCAGGTGG CCGCGTTCGG CCCACCAGCC GGGCCGACTA CGCCGCCCGC CTCTTGCTGG GTGACATGGC CGCGCTTGAA GTCCTGTCAG CCGAAGACCA CACGCTGCTG TGTGACTTGC CGGAACCGCA CGGACCGCTT TTTGTGTGGC TGGAAAACCA ACTGCATGAA CACGGCCCGC AAGCCTGGGT GGCGCTGCGT GAAGGACTGC GCGGGCGCCA GGAGGAAGAA CTCGCCGTTC GGCTCATGAC CGGCTACGAG CTGGCCGGCC CGCTGGAGAC GGATGAATCC AGTAAGGAAC TGCGTGACCT GCTTAACCGC ATGTTGGTTG AAAAGCTCAA AGTGCAGGAA ACCGAAGCCA TCCAGGCGGC CAAAGCGGAT CCGGGCGCAC TGCAACGCTA CCGCGAGCTG CAGGCGCGTC GCTTCAAACT CGAATCGGTG CCGACTCGCT CTGAATAA
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Protein sequence | MSIPQTFIQE LLARADVVEI VGRYVQLKKG GANFMGLCPF HGEKSPSFSV SPSKQFYHCF GCGKNGDAIS FLMEHAGMTF VEAVQDLAQQ YGLQVPEDDA SPQDRARALE QRQKQTTLTD VLERANDAYR KQLKESPRAV DYLKGRGVSG EIAKQFGLGY APEGWRSLAS VFPSYDDPLL VESGLVILNV DENSGEEKRY DRFRDRVMFP IRNVKGECIG FGGRVLGDDK PKYLNSPETP VFSKGRELYG LFEARNALHE QGYALVTEGY MDVVALAQLG FSNAVATLGT ACTAEHLHKL FRFTDAVVFS FDGDAAGRRA ARKALDGALP FATDVRSVKF LFLPPEHDPD SFIREFGKEA FARYVSEAVP LSRFLIDAAR EGCDLNTAEG RAHFASNAKP LWLLLPDGAL KLQLLSEIAD LVQLSSRELT EVWNPSAAGK GNAKSKTYEK HSASPNEYGG YSQKSSIKPP PRPRPGGRVR PTSRADYAAR LLLGDMAALE VLSAEDHTLL CDLPEPHGPL FVWLENQLHE HGPQAWVALR EGLRGRQEEE LAVRLMTGYE LAGPLETDES SKELRDLLNR MLVEKLKVQE TEAIQAAKAD PGALQRYREL QARRFKLESV PTRSE
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