| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2157 |
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| Symbol | |
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| ID | 3961208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2345226 |
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| End bp | 2346989 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637916977 |
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| Product | malto-oligosyltrehalose trehalohydrolase |
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| Protein accession | YP_523412 |
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| Protein GI | 89900941 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0332832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGAGA ACGGGCCAGA CGCTGGCGCG CTCGCACACC CGATGGCGCA TAGCGCCGAC
GGGTGGCATC AGCTGACGCT GCCCGGCGCG CAGGCCGGCG ACCACTACCG CTACCGCCTG
CCCGACGGCC TGCGCGTGCC GGACCCGGCC TCGCGCTACA ACCCCGGCGA TGTGCACGGC
GCCAGCCAGG TGATTGACCC GCACGCCTAT TTGTGGCGGC ACGACACCTG GCGCGGCCGC
CCCTGGCGAG AGGCCGTGAT TTACGAATTG CATGTTGGCG CCTTCACGCC CGAGGGAACC
TTTGCCGCAG CACAAAGCCG CCTGGCGGCG CTGGCCGCGC TCGGCATCAC CGCCGTGGAA
CTAATGCCGC TCGCTGAATT CCCCGGTCGG CGCAACTGGG GCTATGACGG CGTACTCCCC
TTCGCGCCCG ATGCCTCCTA TGGCACCCCG GACGAGCTCA AAGCCCTGAT CGATACCGCC
CACGAGCTCG GTTTGATGGT GTTGCTTGAT GTCGTGTACA ACCACTTCGG GCCGGAGGGC
AACTACCTGC ACGCCTACTG CCCGCATTTT TTCAACCCGG CGCACCAGAC GCCCTGGGGC
GCGGCCATCA ACTACGACGG TGCCGATTCG CGCACGGTGC GCGACTTTTT TATCCACAAC
GCAATTTACT GGGTGGAAGA ATTCCAGTTC GACGGCTTGC GTCTGGATGC CATTCACGCC
ATACGTGATG ACTCCGAACG CCATATCGTG CGCGAGATCT GCGAAGCACT GCGCGCCGGC
CCCGGTCGTG AGCGCCAGGT TCATGTAATT TTGGAGAACG ACGCCAACCA GGCATCTTTT
CTATCGCGCG ACGCCAGCGG TGATCCGCTC GCCGCAACAG CGCAATGGAA CGACGATCTG
CACCATGCCG TCCATGTGCT GACCACCGGC GAGACTGACG GCTACTACGC TGACTACGCC
GACGCACCGG TGGCCCAACT CGGGCGGGCA CTGGCGCAGG GCTTCATCTT CCAGGGGCAG
TCCTCGCCGT TTCGTCATGG CGAGCGACGC GGCGAGCCGA GCACACAGCT GCCACTGGCG
GCCTTCGTCT CTTTTTTGCA GTCGCACGAT CAGGTCGGCA ACCGCGCCTT CGGCCAACGC
ATCCATGTAT TGGGCGATCC GGTGCTGGTG CGTGCCGCCC TCGCCTGTGT GCTGCTGTCA
CCGCACATAC CCATGCTGTT CATGGGTGAA GAATTCGCAG CCTCCACGCC CTTTCTGTAC
TTCTGCGATT TCGGTCCGGC GTTGGCGGAT GCGGTGTCGC GCGGACGGCG TGCCGAGTTC
GGCCGCTTCG CCGGGTTCGC CAGTGAAGCT GACCAGGCAA ACATTCCGGA CCCAAGCATG
GAATCCACCC TTCTGGCGTC CAAGCTGCGC TGGGAAGAGC GTGACACCGC GCCACACAAG
GACTGGCTGG ACGAGGTACG CCACCTGCTG CACCTGCGCC AACGCCGACT GATACCACTG
CTGGCCGGCC AACTAGGCGC TGGCCGCTTT CACTGCGAGG GCGAGACGCT GTCGGTTCAA
TGGCCGCTCG ACCACGCGGG CACTCCAGCG AAAGGTGCGT GCCTGCATCT GCTCGCGCAT
TTCGGCCCGC AGCCGCGCGT CGGCGTGATG GCCCCGCCGG GCGAACTCCT CTATGGCACC
GGCCTTGAAC CCGAGGCGGG TGCCGCGCTA CGGCTCGCGC CCGGCGCAGT CGTTCTAACG
CTACAGGAGA GCCATCTTGT CTAG
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| Protein sequence | MLENGPDAGA LAHPMAHSAD GWHQLTLPGA QAGDHYRYRL PDGLRVPDPA SRYNPGDVHG
ASQVIDPHAY LWRHDTWRGR PWREAVIYEL HVGAFTPEGT FAAAQSRLAA LAALGITAVE
LMPLAEFPGR RNWGYDGVLP FAPDASYGTP DELKALIDTA HELGLMVLLD VVYNHFGPEG
NYLHAYCPHF FNPAHQTPWG AAINYDGADS RTVRDFFIHN AIYWVEEFQF DGLRLDAIHA
IRDDSERHIV REICEALRAG PGRERQVHVI LENDANQASF LSRDASGDPL AATAQWNDDL
HHAVHVLTTG ETDGYYADYA DAPVAQLGRA LAQGFIFQGQ SSPFRHGERR GEPSTQLPLA
AFVSFLQSHD QVGNRAFGQR IHVLGDPVLV RAALACVLLS PHIPMLFMGE EFAASTPFLY
FCDFGPALAD AVSRGRRAEF GRFAGFASEA DQANIPDPSM ESTLLASKLR WEERDTAPHK
DWLDEVRHLL HLRQRRLIPL LAGQLGAGRF HCEGETLSVQ WPLDHAGTPA KGACLHLLAH
FGPQPRVGVM APPGELLYGT GLEPEAGAAL RLAPGAVVLT LQESHLV
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