Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2152 |
Symbol | |
ID | 3961203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2335674 |
End bp | 2336807 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637916972 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_523407 |
Protein GI | 89900936 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGCAA AATCCTGTCA AGAAAACTTG GATTTGATCA CGATGTTTCG TCAACTGATA AACAATAACA CCGCCCAGGA CTGGGTCTAC GCGCTGCTGG CCGCTAGCGC CTTCATGCTG CTGCTGCACA TCCTGCGGCG GCTGGTTTTG CACCATCTGG AGCGCGTTGC CAAGACCACC GATACGGTGA TTGACGACTT CCTGGTCGAA GTCCTGTCGG CCACACGCAT TTTGCTGGTG GCCGCCACGG GCGTCTACCT TGGCACCCAT TTTTTGACGC TGCCCGCTGC GCTGGAGAAA TTCGTTGACC GCGCCTTCAT CACCCTGATC ATTTTGCAGG CTGGCTTTTG GGCCAACCGG GGCCTGATGT TCTGGTTGAA ACACCGTTTT TCCCAAGGTG AAAAGGAAGA CGAAGGCGCG CGCGCCATGA CCTTGTCGCT GTTGTCCTTC CTGGGCCGGG TGGTGGTCTG GGTGCTGGTC TTGCTGCTGA TGCTCGACAA CCTCGGCCTC AACGTGACGG CCCTGGTCAC CAGCCTGGGC ATTGGCGGTA TTGCGGTGGC ACTGGCGGTG CAAAACATTT TGGGTGACCT GTTTGCCTCG CTGTCGATCG CCATCGACAA GCCTTTTGTG ATTGGCGACT TCGTGATTGT GGATGACCTG ATGGGCAGCG TGGAACACGT CGGCCTGAAG ACCACCCGCA TTCGCAGCCT GGGCGGCGAA CAAATCATTT TTTCCAATAA TGATCTGCTG AAAAGCCGCA TCCGCAACTA CAAGCGCATG CAGGAACGCC GCGCCGTGTT CGCCATCGCA GTCACCTATG ACACCCCGGC AAAGAAACTT GAGCAGATTG CGGCACTGAT TCAGCAAGCC ATTGAGGCGC AGGCCGATGC CCGCTTTGAC CGCGCCCACT TCAAGAGTTT TGGCCAGTCT TCGCTGGATT TTGAGGCGGT CTATTACGTT TTGAAACCCG ACTACAACGT CTTCATGGAC GTCCAGCAGG CGATCAACCT GCAACTGGTG CGCCGCTTAG CCGAGCATGA CATCAAGTTT GCCTTCCCGA CCCAGACGCT GTACCTCAAT CGCAGCCCGT CCCAAGTCAA GACGGAAGAT CCAGTGGCAG CGAAGGTTGA ATAG
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Protein sequence | MAAKSCQENL DLITMFRQLI NNNTAQDWVY ALLAASAFML LLHILRRLVL HHLERVAKTT DTVIDDFLVE VLSATRILLV AATGVYLGTH FLTLPAALEK FVDRAFITLI ILQAGFWANR GLMFWLKHRF SQGEKEDEGA RAMTLSLLSF LGRVVVWVLV LLLMLDNLGL NVTALVTSLG IGGIAVALAV QNILGDLFAS LSIAIDKPFV IGDFVIVDDL MGSVEHVGLK TTRIRSLGGE QIIFSNNDLL KSRIRNYKRM QERRAVFAIA VTYDTPAKKL EQIAALIQQA IEAQADARFD RAHFKSFGQS SLDFEAVYYV LKPDYNVFMD VQQAINLQLV RRLAEHDIKF AFPTQTLYLN RSPSQVKTED PVAAKVE
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