| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2145 |
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| Symbol | |
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| ID | 3961196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2326892 |
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| End bp | 2329768 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637916965 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_523400 |
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| Protein GI | 89900929 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase
[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.964291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGATGA GCGATGAACA AACCTCCAGC GAAACAAAAC GATCGGCCCC CCTTGGGGGG
CGCGGGATTG CCTGTACGCT GGATTCCGAG TCGCTGGCAC CGCGCTTGCT GGCGACGGTG
CGCAGCGTGG CCGACGAGTT GCGGCCACAG GCGCGGCTCG CCGCCACCCT GGGATTGGAC
GATTCACTGG AGCGCGACTA CGGCCTGGAC AGCCTGGCCC GTGTCGAGCT GATCGCCCGC
CTCGACCGCG ATCTTGGCGT GTCGCTGGGT GAGGCGGCGA TCACGCAGGC GGAGACGCCG
CGCGACCTGT TGCGTTTCAT CACACCCGTC AGTGGGCGCG GTGCCGCACC GGCGCGCGCA
CCACAGGCGC TCACGTCGCG AGAGGCGGTG AGTGACGACT ATCCGCCGGA CTCGGTCCAG
ACGCTGGTGG ATGTTTTCGA ATGGCACCTG CAGCACCACC CCGACCGCGT GCTCATCACC
CTGTACGAGA ACGGTGACCA GGCCGTCGAT CTGCGCTACG CCGAATTGCA CCGCGAGGCG
GTCGCGCTGG CTGCGGGCTT GCGCGCGCTC GGGCTGGACA AGGGCGACAA GGTGGCGATC
ATGCTGCCCA CCGGGCGCGA GTTCTTTGCC GCGTTCTTTG GCACGCTGTA TGCAGGGCTG
GTGCCGGTGC CGCTGTACCC GCCGGCACGG CCGTCGCAGC TTGAGGACCA CCTGAAACGG
ATCGCGGCCA TTGTGCGCAA TGCCCAGGCG CGGGTGCTGG TGACCGTCGA GCGTGCCAAG
CCGCTGTCGC AGCTGTTGCG GGCCCAGGCC GAAGCCCTGC AGTTCGTCCG CACGGTGGCC
GACCTGTCGC TGGCGGACGC CCCCAGGATG CAGCCCGCGC TCACGGCATC GGACATCGCG
TTCCTGCAGT ACACCTCGGG CAGCACCGGC GATCCCAAGG GGGTGATCCT GACGCACGCC
AACCTGCTGG CCAACCTGCG CGCGATGTGG CGGGCCTCGC AGGTCGGCAG CAGCGACACC
TTCGTCTCCT GGCTGCCGCT GTACCACGAC ATGGGGCTGA TCGGTGCCTG CCTGGGCGCC
CTGTACCTGG GCTTTCATCT GGTGCTGATG TCGCCGCTGG CGTTTCTCGC CCGACCGGCG
CGCTGGCTGG AGACCATCCA CCGCCATCGT GGCACGGTGT CGGCGGCACC CAACTTCGCG
TACGAGCTGT GCCTGTCCAA ACTGACGGAC GCTGAACTGG CTGGACTGGA CCTGTCCTGC
TGGCGGCTGG CGTTCAACGG GGCCGAGCCG GTGAGTCCCG ATACGCTGGA ACGCTTTGCG
GCGCGGTTCG CGCCTTGCAG TTTCAAGCGC GAGGCGCTCA CGCCGGTGTA CGGCCTGGCC
GAAAACACGG TTGGCCTGGC CTTTGGGCCG GTGGGCCGCG GCCCGCTGGT GGATCGCGTC
GATCGGGCCG CGCTCGCCCG CGACGGCGTG GCGGAGCCGG CGCGGCCCGA CGACGCGCAA
GCGCTGCGCA TCGTCTCCTG TGGCTCGCCG CTGCCCGGTC ACGAACTGCG CGTGGTCGGC
GCCGGCGGGC GCGAATTGCC CGAGCGTGAG CAGGGGCGCG TGCAGTTCCG CGGCCCGTCC
AGCACCCAGG GCTACCTGAA CAATCCGGTT GCCAATCAGC GCCTGCTCGA CGGCGACTGG
CTCAACACCG GCGACCTCGG CTACATCGCA GCCGCAGAAC TGTTCCTCAC CGGGCGCGAG
AAGGACATCA TCATCCGCGG TGGCTTCAAC ATCCACCCGC AGGAGCTCGA AAGCGCGGTG
GCCAACATCG CCGGCGTGCG CAAGGGGGGC GTGGCGGTGT TCGCGGCGAC CGATCGTCGC
AGCGGCACCG AACGGCTGGT GGTGCTCGCC GAGACCCGGG TCCGTGAGCC GGCGCAACGT
GCGCAAATGA TCCGGGCCAT CACCGCCCTG TCGGCCACGC TGCTGGGCGC GCCGGCCGAC
GACGTGGTGC TGGCGCCGCC ACGCTCGGTA TTGAAGACGT CCAGCGGCAA GACCCGCCGC
GCCGCCTGCC GCGAGTTGTA CGAGCAGGGC CGGCTCGGCA CGACGCAGCG CCCGCCCTGG
CAGCAATGGG CGGCCTTGGC CGCGACGGCG GCGGCGGCGC GGGTTCGCCG CGCGATCCGC
ACAACAGGCC GACTGGTCTG GGGGCTGTGG GCCTGGGCCG TGTTCTGCAC GCTGGCGGCA
CTGGCGTGGG GTGCGGTAAT GGTGTTGCCC GGCGTGGCCC GGCGCCGACG GGTCACGCGC
GCGCTGACGC GCTTGCTGAT CCGGCTGATC GGCCTGCCGC TGCGGGTCGA GGGGCTGGCG
CGGCTGCCGG CGGCGGGGCC GCGCATCGTG GTGGCCAACC ACGCCAGCTA TGTCGATTCG
ATGCTGTTGG GTGCCGTGCT GCCGCCCGAG TTCTCCTTCG CCGCCAAGCG CGAGCTGGCC
GACGCGGCGC TGATCGGCCC GGCGCTGCGC CGGCTAGGGA TTGCCTTCGT CGAGCGCGTG
GACGCGGCGC AGGGGATCGA GGACACCAAG GCGCTGCAAG CGCGTGTGCG TGCCGGCGAA
TCGATGGTGT TCTTCCCCGA AGGCCGGCTG CGGCGGGCCA GTGGCCTGCA GCCTTTCAAG
CTCGGGGCCT TCGTCATCGC CGCCGAAACG GCGACGCCGG TGGTGCCGGT GGCGCTCAAC
GGCACCCGCT CGCTGCTGCG CGATGGGGCC TGGCTGCCGC TGCGCTGCGC TATTCAGTTG
ACGATTGGCG AGGCGATCCC TGCGACGGGT CCAGGCTGGA GCCGCGCGCT TGAACTGCGC
GATGCGGCGC GCAAAGCGCT GGCCGCCCAT CTGGCGGAGG CGACGCACGA TGTTTGA
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| Protein sequence | MSMSDEQTSS ETKRSAPLGG RGIACTLDSE SLAPRLLATV RSVADELRPQ ARLAATLGLD
DSLERDYGLD SLARVELIAR LDRDLGVSLG EAAITQAETP RDLLRFITPV SGRGAAPARA
PQALTSREAV SDDYPPDSVQ TLVDVFEWHL QHHPDRVLIT LYENGDQAVD LRYAELHREA
VALAAGLRAL GLDKGDKVAI MLPTGREFFA AFFGTLYAGL VPVPLYPPAR PSQLEDHLKR
IAAIVRNAQA RVLVTVERAK PLSQLLRAQA EALQFVRTVA DLSLADAPRM QPALTASDIA
FLQYTSGSTG DPKGVILTHA NLLANLRAMW RASQVGSSDT FVSWLPLYHD MGLIGACLGA
LYLGFHLVLM SPLAFLARPA RWLETIHRHR GTVSAAPNFA YELCLSKLTD AELAGLDLSC
WRLAFNGAEP VSPDTLERFA ARFAPCSFKR EALTPVYGLA ENTVGLAFGP VGRGPLVDRV
DRAALARDGV AEPARPDDAQ ALRIVSCGSP LPGHELRVVG AGGRELPERE QGRVQFRGPS
STQGYLNNPV ANQRLLDGDW LNTGDLGYIA AAELFLTGRE KDIIIRGGFN IHPQELESAV
ANIAGVRKGG VAVFAATDRR SGTERLVVLA ETRVREPAQR AQMIRAITAL SATLLGAPAD
DVVLAPPRSV LKTSSGKTRR AACRELYEQG RLGTTQRPPW QQWAALAATA AAARVRRAIR
TTGRLVWGLW AWAVFCTLAA LAWGAVMVLP GVARRRRVTR ALTRLLIRLI GLPLRVEGLA
RLPAAGPRIV VANHASYVDS MLLGAVLPPE FSFAAKRELA DAALIGPALR RLGIAFVERV
DAAQGIEDTK ALQARVRAGE SMVFFPEGRL RRASGLQPFK LGAFVIAAET ATPVVPVALN
GTRSLLRDGA WLPLRCAIQL TIGEAIPATG PGWSRALELR DAARKALAAH LAEATHDV
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