Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2123 |
Symbol | |
ID | 3962476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2299338 |
End bp | 2300975 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637916943 |
Product | integral membrane protein MviN |
Protein accession | YP_523378 |
Protein GI | 89900907 |
COG category | [R] General function prediction only |
COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0227966 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCTGAGG ATGTTGCCAG CAAAGCCTGC GATTCTAACA GGTGCTGGTC TGACGCAGCT ACACTTCGGG CGGTGAGTCT CCTCAAATCT GCTTCTATTG TTTCCCTGCT GACACTGGTG TCACGCATTA CCGGGTTGGT GCGCGAACTT CTGATTGCAT CGACCTTTGG CGCCAATGCC ATGACGGACG CGTTTAATGT CGCGTTTCGT ATCCCCAACC TGTTTCGCCG CTTTTTTGGC GAAGGCGCCT TCAGTCAGGC CTTTGTGCCG GTGCTGGCGG CCTCCAAAGC GCAGCACGGC GAGGCGGCCA CCCAAACCGT GATCAACCAT GCCGCCACGG TCCTGACCTG GGCTCTGTTG GTGCTCAGCG TCATCGGCGT GGCGGCAGCG CCGGCCCTGG TGTGGGCCAT GGCCAGTGGC CTGCAACAGG ACCCGCGCGG CTTTGAGGTG GCTATTGTCA TGACGCGCTG GATGTTTCCC TACATTGCCT TCATGTCGCT GGTGGCGCTG GCCGCGGGTG TACTCAATAC CTGGAAGCAT TTTGCCGTAC CGGCCGCCAC GCCGGTGTTG TTGAACCTGT GCATGATTGT CGCGGCGTGG CTGGGTGCGC CCTGGTTCAA GACCCTGGGG CTGGAGCCGA TTTACGCGCT GGCCGGTGGC GTGTTGCTCG GTGGCGTGCT GCAACTGGGT GTGCAGTGGT GGGCCTTGAA AAAACTCGGT CTCGCCCCCG CCATCGGTCT GCGCTGGCGT GTGTTGCGCG CGGCTTGGGC TGATCCCGCC ACCAAGAACA TCCTGCGCCT GATGGGACCC GCTTTGTTGG GGGTGAGCGT GGCGCACATC TCAATGCTGA TCAACACCCA GATCGCCTCG CATCTGGCGC CCGGCAGCGT GAGCTGGATC ACCTATGCCG ACCGCTTGAT GGAGTTCCCC ACGGCCATGC TCGGTGTCGC CATGGGCGTG GTGCTGATGC CCCAGCTTGC ACTGGCCCGC GCAGCGGGAG ACAAGGCGAA ATATTCCGCC ATGCTGGACT GGGGGCTGCG CCTGGTGGTG CTGCTGGCCG TACCGTGCGC GGTGGCGCTG ATCGTGTTCC CGATGCCGCT GGTGGCCGTG CTGTACCACT ACGGTGCCAT GACTGACTTG GACGTGCAAA AAATTACTTA CGCACTGATG GGGTGGGGCG TCGGCTTGAT CGGGATCGTG GCCATCAAGG TCCTGGCGCC GGGGTATTAC GCCAACCAGG ATACCAAAAC GCCGGTCACC ATAGCGGTTG CCGTGTTGAT CATCACGCAG TTGCTCAACG TTGTGCTGGT GCCTGTGTTT GCCCATGCCG CGCTGACGCT GTCAATTGGC ATCGGCGCCA TGATCAATGC CGGCTGGCTG CTTGTGGGCC TCATGCGGCG TGGCAGCTAC AAGCCCGAGC CGGGTTGGGG CGCTTTTGTG TTGCAGGTGA TTGCCGCCTG CGCTTTGCTG GCTGTCTTTT TGATGTGGGC CAATAGTGCT TTTGCCTGGA CCCAGCTGCG TAGCGAGAGT TTCAAGAGAA TTTGGCTTCT AGCCCTCGTC CTTATTGGCG CTGGCGCTAT ATATTTTGCA GCTATCTGGG CGGCGGGCCT GAAGCTGCGC CAGTTCTTGC GGCGCTGA
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Protein sequence | MSEDVASKAC DSNRCWSDAA TLRAVSLLKS ASIVSLLTLV SRITGLVREL LIASTFGANA MTDAFNVAFR IPNLFRRFFG EGAFSQAFVP VLAASKAQHG EAATQTVINH AATVLTWALL VLSVIGVAAA PALVWAMASG LQQDPRGFEV AIVMTRWMFP YIAFMSLVAL AAGVLNTWKH FAVPAATPVL LNLCMIVAAW LGAPWFKTLG LEPIYALAGG VLLGGVLQLG VQWWALKKLG LAPAIGLRWR VLRAAWADPA TKNILRLMGP ALLGVSVAHI SMLINTQIAS HLAPGSVSWI TYADRLMEFP TAMLGVAMGV VLMPQLALAR AAGDKAKYSA MLDWGLRLVV LLAVPCAVAL IVFPMPLVAV LYHYGAMTDL DVQKITYALM GWGVGLIGIV AIKVLAPGYY ANQDTKTPVT IAVAVLIITQ LLNVVLVPVF AHAALTLSIG IGAMINAGWL LVGLMRRGSY KPEPGWGAFV LQVIAACALL AVFLMWANSA FAWTQLRSES FKRIWLLALV LIGAGAIYFA AIWAAGLKLR QFLRR
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