Gene Rfer_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2079 
Symbol 
ID3961030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2254494 
End bp2255279 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content58% 
IMG OID637916899 
ProductIojap-related protein 
Protein accessionYP_523335 
Protein GI89900864 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACCA CTACCTTCTC CACCATCGCC AAAAAAGACA TCCAAAAACT CCAACGTGCC 
ATAGTTGATG GCCTCGAAGA TGTCAAAGCC CAGGACATTG TGGTCTTTGA TACCGAACAC
CTGTCCGCCT TGTTTGAGCG GGTCATCATT GCCTCGGGCA CGTCGAACCG GCAAACCAAG
GCGCTGGCCG CCAGCGTGCG CGATGCGGTG CGGGATGCCG GTTTTGCCAA GCCACGCATG
GAAGGCGAGA CCAATGGCGA GTGGATCATT GTGGATTGCG GCCAAGCGGT GGTGCACATC
ATGCAGCCCA ATTTTCGACA GTACTACAAC CTGGAAGAAT TGTGGGGCGA CAAACCGGTG
CGACTCAAAT TCGGCGCGGC AAAGCCGGTC GTGAAGGAAG CGGCCAAACC GGTCAAAGAG
GTGAAGGCTG TTAAAGCCGT TAGAGCAGTC GCTCAACCGA TAGCGGATAT CAGGCGCTCC
AACGCCGCCA AGAAGGGTGT GGCCGAGGCA TTCCCGTCCA AAGCACAGCT GCAAAAGGCG
GCGTTGGCGG CCAAGTCGGC GGCGGCAAAG GTACCGGCAA AAAAAGTAGC TGCCAAAAAG
GCGCCAGCCA AAGTGAGCGC TGCGGTGACC ACTCCGAGAG TCGCTCCCAA ACCCGCTGCC
AAGGTGGCTG TGAAGAAAGT CATCGTCAAC GATCCGGCCA AGAAAGTGGC TGCAAAGAAG
GTGGTGGCCA AAGCCGCAGT CGCCAAAAAA GCACCGGCCA AGAAGACGGC TGTGCGCAAA
GCCTGA
 
Protein sequence
MTTTTFSTIA KKDIQKLQRA IVDGLEDVKA QDIVVFDTEH LSALFERVII ASGTSNRQTK 
ALAASVRDAV RDAGFAKPRM EGETNGEWII VDCGQAVVHI MQPNFRQYYN LEELWGDKPV
RLKFGAAKPV VKEAAKPVKE VKAVKAVRAV AQPIADIRRS NAAKKGVAEA FPSKAQLQKA
ALAAKSAAAK VPAKKVAAKK APAKVSAAVT TPRVAPKPAA KVAVKKVIVN DPAKKVAAKK
VVAKAAVAKK APAKKTAVRK A