Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2056 |
Symbol | |
ID | 3962103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2226393 |
End bp | 2227340 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637916876 |
Product | auxin efflux carrier |
Protein accession | YP_523312 |
Protein GI | 89900841 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.503376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAATC CTGTTCTCTC TTCCCTGCTG CCGGTGGTGC TGTTGGTTGC TATTGGTTTT ATAACTGGCC GCGCAGGCTG GATAAGGGCT GAGGCCATAA AAGACTTGTC AAACCTGGTC TTCATGGTGC TCACACCGGC GCTGCTGTTT CGCACCATGA GCACGGTGCA CGTGGAGCAG CTCAACTTCA AACCGGTGCT GATGTACTTT GTGGCGGCCA TGCTGCTGTT TGGCTTCGTT CTGATTTGGC AAGGGGGAAC GCGCCGCGCG GCGGTGCTGG CGCTGGCTGC CACTTTCAGC AACACGGTGA TGATTGGCAT CCCGCTGGTG GGGCTGGCTT ATGGCCAGGC CGGCTTGGTG ACACTGTTCA CCTTGATCTC GGTCCATGCG CTGATGCTGT TGACGTTTGC CACCGTGGTG CTGGAACTGG CAGTCGCCCG CGAGAAAGTC GCGGCCGGTG GCGGGGGCGG TCAGCACATG CTGTTGACGG TGCTGGGCGC GGTGCGCAAC GGCATCATTC ATCCGGTGCC TTTGCCCATC ATCGTGGGCT TGCTGTTTGC ACAAACCGGC CAGGTGATGC CAGCGGTGGT GGATCGCCCG CTCCAGTTGT TGGGCAACGC TTTTGGCCCG GTGGCCCTGG TGCTGGTTGG GGTAACGCTG ACCGCTGTGC GCATCGGGGA CCACTTCAAG GCGGCACTGG GTTTGAGTCT GATCAAGAAC CTGGCGTTCC CGGCGCTGGT GGCGCTGCTG TGCTGGGGTT TGGGCTTGAG TGGCTTGCAG CTGACCGTGA TGATCGTGAC AGCGGCGCTG CCGATCGGTG CCAATGTGTT CATGTTTTCG CAGCGTTACC AGGTCGCTGA AGAATTGGTG ACGGCCAGCA TGGCGGTGTC CACCGGCCTG GGGCTGGTGA CGCTCTCCTT GGTGATGGCG CTGGCGAGCT TGCTCTGA
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Protein sequence | MINPVLSSLL PVVLLVAIGF ITGRAGWIRA EAIKDLSNLV FMVLTPALLF RTMSTVHVEQ LNFKPVLMYF VAAMLLFGFV LIWQGGTRRA AVLALAATFS NTVMIGIPLV GLAYGQAGLV TLFTLISVHA LMLLTFATVV LELAVAREKV AAGGGGGQHM LLTVLGAVRN GIIHPVPLPI IVGLLFAQTG QVMPAVVDRP LQLLGNAFGP VALVLVGVTL TAVRIGDHFK AALGLSLIKN LAFPALVALL CWGLGLSGLQ LTVMIVTAAL PIGANVFMFS QRYQVAEELV TASMAVSTGL GLVTLSLVMA LASLL
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