| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1996 |
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| Symbol | |
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| ID | 3962220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2151696 |
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| End bp | 2154035 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637916816 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_523252 |
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| Protein GI | 89900781 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.685861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTAAAT GTCTGGTGTT GACATTCAAC ATCGGCTTGA TTTTTTTAAT ACTAAAAATG
CAATTCAATC GCTTTGCTCT GCGCACCGTA TCCGCCGTCG CGTCTCTGGT TTTTGTGGCC
GGCACGGCCT GGGCGGTCAG TCCTTTCACT GTGCGCGATA TTCGTATTGA GGGCTTGCAG
CGGGTGGAGC CAGGCACTGT TTTCGTGTCG CTGCCGGTTC GCGTCGGCGA CGTCTATAAC
GACGAAGTGG GCTCTTCCGC AATCCGGACA CTTTTTGCGC TGGGTCTGTT CAAGGACGTC
CGCATTGAGG TCAGTGGTGA CGTGTTGGTG ATTGTGGTCG AGGAGCGGCC CACCGTTGCG
GAGGTTGAGT TTGTCGGCAC CAAAGAGTTT GACAAGGACG TCCTCAAAAA AGCCTTGCGT
GATATCGGCC TGGCTGATGG CCGCCCGTTT GACAAAGCCC AGCTTGACCG CGCTGAACAG
GAACTCAAAC GGCAATACAT CAATCGCAGC CTGTATGCCG CAGAAGTGGT GACGACGGTG
ACGCCGATTG AACGCAACCG GGTCAACCTG ACGTTTACTG TCACCGAGGG CGAGGCGGCA
AAGATCAGCG AAATTCGGAT CGTTGGCAAC CATGTTTTTG GCGAGTCAAC CTTGCGTGGC
CTGTTTGATC TGGACACCGG TGGCTGGCTG AGCTGGTACA CCAAGTCGGA TCGTTATTCA
CGTGCCAAAC TCAATGCTGA TATTGAAACC CTGCGTTCTT ATTACCTGAC ACGGGGTTAT
CTGGAGTTCA AAGTGGACTC AACGCAGGTG GCGATTTTGC CTAATAAGAC GGATATTTCC
ATCACGATCA ACATCACCGA AGGTGAGCGC TTTATCGTGA GTGGCGTCAA GCTTGAAGGT
AATTTTCTGG GCAAAGACGA CGAGTTCAAG TCGTTGGTGA CAATTCGACC GGGGCAGGCC
TATAACGCCG ATGAAGTTGC CAAGACCACG AAGGCGTTCA CCGACTATTT CGGCAATTTC
GGCTTTGCTT TTGCGCGGGT GCAGGCGCGC CCTGACATCG ATCGCGTCAA CAACCGTGTC
GCCCTGGTCC TGCAGGCAGA GCCGTCGCGG CGGGCCTATG TGCGCAAAAT CAATGTAGCA
GGCAACAGTC GCACGCGTGA TGTGGTGGTG CGCCGGGAGT TTCGGCAATT TGAGGCATCC
TGGTACGACG CCGACAAGAT CAAGCTGTCA CGCGACCGCG TGGATCGCCT GGGCTACTTC
AGTGAGGTGG GTATCGAAAC CCAGGAAGTA GCCGGGTCAC CGGATCAGGT TGACCTGAGC
ATCAATGTTG TTGAAAAACC GACCGGTAGC CTGAGTCTGG GTGCTGGCTT TTCAAGTGCC
GATGGGCTCG GGCTTTCCTT TGGTTTGAAG CAGGAAAACG CCTTTGGTTC GGGTAACTCC
TTGGGTGTGC AAGTCAACAC CAGCAAGATC AACCGGGTCA TCGTTTTCAA CACCACCGAC
CCCTATTTCA CGGCGGACGG TGTGTCCAGA ACCATTGATG TCTACCATCG GACCAGCAGT
CCGTATCAGG ATACAAGCTA TTACAAGGTG GTGACCTCCG GCGGCAGTTT GCGCTTTGGC
GTTCCTTTCA CCGAGACGGA TACCGTTTAT TTTGGGGCTG GCGCCGAGAA GACGACGATC
ACGCCCGGTA CTCTGCTGCC AAATTCGTAC CTCCCTTACG TTGACCATGA CAACGTGGCG
ATTCCGTTGA CGGTGGGCTG GTCGCGTGAT CGGCGTGACA GTGCATTGGC GCCGAACTCT
GGTCGTTATC AACGAGCGAA TGCCGAGTGG TCCGTTGCAG GCGACCTTCG TTATGTGCGT
GCCACTTATC AGTACCAAGA ATACATACCG CTCAACAAGC AGTTCACGGC TGCGTTTAAC
GGCGAATTGG GCTTGGGTGC GGCCGTCGGC GATAAAACTT ATCCAGTGTT TAAAAATTTC
TACGGGGGCG GTTTGGGGTC GGTGCGGGGT TTTGAACAGG GCAGTCTGGG ACCGAAGGAC
AGCACAGGAA CCGTCCTGGG TGGTACCAAA AAGGTGAATT TGAACGCCGA AATACTTTCC
CCCTTTCCCG GCGCCGGCAA TGACAGGACC TTGCGGATGT TTGCGTTCCT TGATGTTGGC
AGTGTGTCGG GTTCGGGCGC GGTCAATGAA AATGCGGGCA GCCTGCGCTC ATCAGTCGGG
GTGGGCGTCA GCTGGATATC GCCGGTCGGT CCGTTGCGAC TGGCGATTGC CAAGCCCATC
AAAAAGTTCG AAGGCGATAA AATCCAGACC ATGCAATTTC AAATTGGAAC GACTTTCTAA
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| Protein sequence | MAKCLVLTFN IGLIFLILKM QFNRFALRTV SAVASLVFVA GTAWAVSPFT VRDIRIEGLQ
RVEPGTVFVS LPVRVGDVYN DEVGSSAIRT LFALGLFKDV RIEVSGDVLV IVVEERPTVA
EVEFVGTKEF DKDVLKKALR DIGLADGRPF DKAQLDRAEQ ELKRQYINRS LYAAEVVTTV
TPIERNRVNL TFTVTEGEAA KISEIRIVGN HVFGESTLRG LFDLDTGGWL SWYTKSDRYS
RAKLNADIET LRSYYLTRGY LEFKVDSTQV AILPNKTDIS ITINITEGER FIVSGVKLEG
NFLGKDDEFK SLVTIRPGQA YNADEVAKTT KAFTDYFGNF GFAFARVQAR PDIDRVNNRV
ALVLQAEPSR RAYVRKINVA GNSRTRDVVV RREFRQFEAS WYDADKIKLS RDRVDRLGYF
SEVGIETQEV AGSPDQVDLS INVVEKPTGS LSLGAGFSSA DGLGLSFGLK QENAFGSGNS
LGVQVNTSKI NRVIVFNTTD PYFTADGVSR TIDVYHRTSS PYQDTSYYKV VTSGGSLRFG
VPFTETDTVY FGAGAEKTTI TPGTLLPNSY LPYVDHDNVA IPLTVGWSRD RRDSALAPNS
GRYQRANAEW SVAGDLRYVR ATYQYQEYIP LNKQFTAAFN GELGLGAAVG DKTYPVFKNF
YGGGLGSVRG FEQGSLGPKD STGTVLGGTK KVNLNAEILS PFPGAGNDRT LRMFAFLDVG
SVSGSGAVNE NAGSLRSSVG VGVSWISPVG PLRLAIAKPI KKFEGDKIQT MQFQIGTTF
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