Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1975 |
Symbol | rimO |
ID | 3964330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2119856 |
End bp | 2121250 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637916794 |
Product | ribosomal protein S12 methylthiotransferase |
Protein accession | YP_523231 |
Protein GI | 89900760 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00113002 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAG TTATTACAAA AAGCAATACA GCACCCAAAG TCGGTTTCGT CAGCTTGGGT TGCGCCAAGG CGCTGACAGA TTCCGAACTG ATCCTCACGC AATTGAGCGC CGAGGGTTAT CAAACCTCCA AGACATTTCA GGGTGCCGAT CTGGTGATCG TCAACACTTG TGGTTTCATC GATGATGCGG TCAAAGAGAG TCTGGACACC ATCGGTGAAG CGCTGGCCGA AAACGGCAAG GTGATCGTCA CCGGTTGTTT GGGCGCCAAG ACCGCCGAGG GTGGTGGCAA CCTGGTGCGG CAAATGCACC CGAGCGTGCT GGCCGTCACC GGCCCGCAGG CAACGCAGGA GGTGATGGAT GCGGTGCATG CCAACCTGCC CAAGCCGCAC GACCCGTTTA TTGATCTGGT GCCCAATGCT TTTGGTGTGG CGGGCATCAA GCTCACGCCC CGGCACTACG CCTACATCAA GATCAGCGAA GGCTGCAACC ACCGCTGCAC GTTTTGCATC ATTCCGTCCA TGCGCGGCGA TCTGGTGTCG CGCCCGATTG GTGACGTGCT CAAGGAAGCG CGCGCCCTGT TTGAAGGCGG TGTGAAAGAG TTGCTGGTGA TCAGCCAGGA CACGTCAGCG TATGGCGTGG ATGTCAAATA CCGCACCGGT TTCTGGGATG GCAAACCCAC CAAGACCCGC CTGCTGGAAC TTGCCGCAGC ACTGGGCGAC ATGGCTGAGC CTTATGGTGC CTGGGTGCGT TTGCACTATG TTTACCCGTA CCCGAGTGTC GATGACTTGT TGCCTTTGAT GGCCGCCGGC AAAGTGTTGC CCTACCTGGA TGTGCCTCTG CAACACAGTC ACCCGGAGGT GCTCAAGCGC ATGAAACGCC CGGCCAGCGG CGAGAAAAAT CTGGAGCGCA TCCAGCGCTG GCGTGAGGTC TGTCCCGATA TTGTGGTGCG CAGCACGTTC ATCGCAGGAT TTCCGGGCGA AACGGAAGAA GAGTTTTCGC ATTTGCTCGA TTTCATGCGG GAGGCTCAAA TTGACCGTGC CGGTTGTTTT GCCTACAGCC CGGTGCAGGG TGCTGTCGCC AATGACATTG GCGGCATGTT GCCGATTGAA TTGCGCGAAG AGCGGCGCGC ACGCTTCATG GCGGTCGCCG AGGCAGTCTC AAGCGCCAAA CTGCAACAGC GCATCGGCGC CACGATGCAG GTGTTGGTCG ATTCCGCGCC TGGTTTGGGT AAAAAGGGTG GCCTCGGCCG CTCCTATGCC GATGCGCCTG AGATTGACGG TGTGGTGAAA CTGCTGCCGC CGGAAAAGAT CAGCAAGACT TTACGGGTTG GTGAATTTAC CAAAGCGCGC ATTGTCGGTG CACAGGGACA CGATCTTGTG GCTCAGCCGT TTTAA
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Protein sequence | MSEVITKSNT APKVGFVSLG CAKALTDSEL ILTQLSAEGY QTSKTFQGAD LVIVNTCGFI DDAVKESLDT IGEALAENGK VIVTGCLGAK TAEGGGNLVR QMHPSVLAVT GPQATQEVMD AVHANLPKPH DPFIDLVPNA FGVAGIKLTP RHYAYIKISE GCNHRCTFCI IPSMRGDLVS RPIGDVLKEA RALFEGGVKE LLVISQDTSA YGVDVKYRTG FWDGKPTKTR LLELAAALGD MAEPYGAWVR LHYVYPYPSV DDLLPLMAAG KVLPYLDVPL QHSHPEVLKR MKRPASGEKN LERIQRWREV CPDIVVRSTF IAGFPGETEE EFSHLLDFMR EAQIDRAGCF AYSPVQGAVA NDIGGMLPIE LREERRARFM AVAEAVSSAK LQQRIGATMQ VLVDSAPGLG KKGGLGRSYA DAPEIDGVVK LLPPEKISKT LRVGEFTKAR IVGAQGHDLV AQPF
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