Gene Rfer_1969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1969 
SymboldnaK 
ID3963085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2114912 
End bp2116867 
Gene Length1956 bp 
Protein Length651 aa 
Translation table11 
GC content56% 
IMG OID637916788 
Productmolecular chaperone DnaK 
Protein accessionYP_523225 
Protein GI89900754 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID[TIGR02350] chaperone protein DnaK 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00608101 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAGAA TCATCGGCAT CGATCTGGGC ACGACCAACA GTTGCGTCGC CATCATGGAG 
GGCAACACGC CCAAGGTCAT TGAAAACTCT GAAGGGGCGC GCACCACGCC GTCCATCATT
GCTTATCAGG AAGACGGCGA AGTACTGGTC GGCGCCTCGG CCAAGCGTCA GGCGGTGACC
AACCCGAAGA ACACGCTGTA CGCCGTCAAG CGGCTGATTG GCCGCAAGTT CACTGAAAAG
GAAGTCCAGA AAGACATCAA CCTGATGCCT TACAAAATTG CAGCCGCTGA CAATGGTGAC
GCCTGGGTCG AAGTGCGCGG CAACCGGATG GCGCCCCAGC AGGTCAGCGC CGATGTGCTG
CGCAAAATGA AAAAGACGGC CGAGGACTAC CTGGGCGAAA CGGTCACCGA GGCCGTTATT
ACGGTGCCGG CTTATTTCAA TGACGCACAG CGTCAGGCCA CCAAAGATGC GGGTCGCATC
GCCGGACTCG ATGTCAAACG CATCATCAAC GAACCTACCG CTGCAGCACT GGCTTACGGT
CTGGACAAGA CTGAAAAAGG CGACCGCAAA ATCGCGGTTT TTGACTTGGG TGGCGGCACT
TTTGACGTGT CCATCATTGA AATTGCCGAC GTTGACGGCG AAAAGCAGTT TGAAGTTTTG
TCCACCAACG GCGATACCTT CTTGGGCGGC GAAGATTTTG ACCAACGCAT CATCGACTTC
GTCATCGCCG AGTTCAAGAA AGAGCAAGGG GTTGATCTGG GCAAGGACGT GCTGGCCCTG
CAGCGCCTGA AAGAAGCCGC CGAGAAGGCC AAGATTGAGC TCTCCAGCAG TGCGCAGACT
GACATCAACC TGCCGTACGT GACGGCCGAT GCTTCCGGCC CGAAACACCT GAGCATCAAG
CTCACCCGCG CCAAGCTTGA GTCACTGGTT GAAGAATTGA TCGAACGCAC CATTGCGCCT
TGCCGCACCG CCATCAAGGA CGCTGGTGTC AACGTGGCTG ACATCAACGA CGTGATTCTG
GTCGGCGGCA TGACGCGCAT GCCCAAGGTG CAGGAAAAGG TCAAGGAATT GTTTGGACGC
GAGCCGCGCA AGGACGTGAA CCCGGACGAA GCCGTGGCCG TCGGTGCTGC CATTCAAGGC
CAGGTGCTGT CCGGCGACCG CAAGGACGTG TTGTTGCTCG ACGTGACGCC TTTGAGCCTG
GGTATTGAAA CGCTGGGCGG TGTCATGACC AAGATGATCA CCAAGAACAC CACCATCCCG
ACCAAGTTTG CACAGACCTT CTCGACCGCC GACGACAACC AGCCGGCTGT GACCATCAAG
GTGTTTCAGG GCGAACGTGA AATCGCCGCT GGCAACAAGA TGCTCGGTGA GTTCAACCTG
GAAGGTATTC CACCGTCCGC CCGGGGCACA CCGCAAATTG AAGTGTCGTT TGACATCGAC
GCCAACGGCA TCCTGCATGT GGGCGCCAAG GACAAAGGCA CAGGTAAAGA AAACAAGATC
ACGATCAAGG CCAATTCCGG CTTGACCGAA GCGGAAATTC AGCAAATGGT GAAAGACGCT
GAGTTGAACG CCGCCGACGA CAAGCGCAAG CTTGACCTGG TGCAGGCCAA GAACCAGGCC
GATGCCAGCT TGCACAGCGT GAAGAAGAGC CTGACCGAAT ACGGCGACAA GCTCGAAGCC
GGCGAGAAGG AAAAGATCGA AGAAGCGATC AAGCACCTGG AAGAAGCCAT CAAAGGCGAC
GATAAGGCGC ATATTGAGGA AAAAAGCACC GCTTTGATGA CCATCAGCCA GAAGCTGGGC
GAAAAAATGT ATGCCGATAT GCAGGCCAAA CAAGCAGCTG AAGCGGGCGC AGGCGATCCA
GGTGCCCAAG CGGCAGCGGG TGCACAAAAC ACTTCAAACC AGGCGGCTGA CGACAATGTG
GTCGACGCGG AAGTGAAAGA AGTCAAAAAA GGTTAA
 
Protein sequence
MGRIIGIDLG TTNSCVAIME GNTPKVIENS EGARTTPSII AYQEDGEVLV GASAKRQAVT 
NPKNTLYAVK RLIGRKFTEK EVQKDINLMP YKIAAADNGD AWVEVRGNRM APQQVSADVL
RKMKKTAEDY LGETVTEAVI TVPAYFNDAQ RQATKDAGRI AGLDVKRIIN EPTAAALAYG
LDKTEKGDRK IAVFDLGGGT FDVSIIEIAD VDGEKQFEVL STNGDTFLGG EDFDQRIIDF
VIAEFKKEQG VDLGKDVLAL QRLKEAAEKA KIELSSSAQT DINLPYVTAD ASGPKHLSIK
LTRAKLESLV EELIERTIAP CRTAIKDAGV NVADINDVIL VGGMTRMPKV QEKVKELFGR
EPRKDVNPDE AVAVGAAIQG QVLSGDRKDV LLLDVTPLSL GIETLGGVMT KMITKNTTIP
TKFAQTFSTA DDNQPAVTIK VFQGEREIAA GNKMLGEFNL EGIPPSARGT PQIEVSFDID
ANGILHVGAK DKGTGKENKI TIKANSGLTE AEIQQMVKDA ELNAADDKRK LDLVQAKNQA
DASLHSVKKS LTEYGDKLEA GEKEKIEEAI KHLEEAIKGD DKAHIEEKST ALMTISQKLG
EKMYADMQAK QAAEAGAGDP GAQAAAGAQN TSNQAADDNV VDAEVKEVKK G