Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1969 |
Symbol | dnaK |
ID | 3963085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2114912 |
End bp | 2116867 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637916788 |
Product | molecular chaperone DnaK |
Protein accession | YP_523225 |
Protein GI | 89900754 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00608101 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAGAA TCATCGGCAT CGATCTGGGC ACGACCAACA GTTGCGTCGC CATCATGGAG GGCAACACGC CCAAGGTCAT TGAAAACTCT GAAGGGGCGC GCACCACGCC GTCCATCATT GCTTATCAGG AAGACGGCGA AGTACTGGTC GGCGCCTCGG CCAAGCGTCA GGCGGTGACC AACCCGAAGA ACACGCTGTA CGCCGTCAAG CGGCTGATTG GCCGCAAGTT CACTGAAAAG GAAGTCCAGA AAGACATCAA CCTGATGCCT TACAAAATTG CAGCCGCTGA CAATGGTGAC GCCTGGGTCG AAGTGCGCGG CAACCGGATG GCGCCCCAGC AGGTCAGCGC CGATGTGCTG CGCAAAATGA AAAAGACGGC CGAGGACTAC CTGGGCGAAA CGGTCACCGA GGCCGTTATT ACGGTGCCGG CTTATTTCAA TGACGCACAG CGTCAGGCCA CCAAAGATGC GGGTCGCATC GCCGGACTCG ATGTCAAACG CATCATCAAC GAACCTACCG CTGCAGCACT GGCTTACGGT CTGGACAAGA CTGAAAAAGG CGACCGCAAA ATCGCGGTTT TTGACTTGGG TGGCGGCACT TTTGACGTGT CCATCATTGA AATTGCCGAC GTTGACGGCG AAAAGCAGTT TGAAGTTTTG TCCACCAACG GCGATACCTT CTTGGGCGGC GAAGATTTTG ACCAACGCAT CATCGACTTC GTCATCGCCG AGTTCAAGAA AGAGCAAGGG GTTGATCTGG GCAAGGACGT GCTGGCCCTG CAGCGCCTGA AAGAAGCCGC CGAGAAGGCC AAGATTGAGC TCTCCAGCAG TGCGCAGACT GACATCAACC TGCCGTACGT GACGGCCGAT GCTTCCGGCC CGAAACACCT GAGCATCAAG CTCACCCGCG CCAAGCTTGA GTCACTGGTT GAAGAATTGA TCGAACGCAC CATTGCGCCT TGCCGCACCG CCATCAAGGA CGCTGGTGTC AACGTGGCTG ACATCAACGA CGTGATTCTG GTCGGCGGCA TGACGCGCAT GCCCAAGGTG CAGGAAAAGG TCAAGGAATT GTTTGGACGC GAGCCGCGCA AGGACGTGAA CCCGGACGAA GCCGTGGCCG TCGGTGCTGC CATTCAAGGC CAGGTGCTGT CCGGCGACCG CAAGGACGTG TTGTTGCTCG ACGTGACGCC TTTGAGCCTG GGTATTGAAA CGCTGGGCGG TGTCATGACC AAGATGATCA CCAAGAACAC CACCATCCCG ACCAAGTTTG CACAGACCTT CTCGACCGCC GACGACAACC AGCCGGCTGT GACCATCAAG GTGTTTCAGG GCGAACGTGA AATCGCCGCT GGCAACAAGA TGCTCGGTGA GTTCAACCTG GAAGGTATTC CACCGTCCGC CCGGGGCACA CCGCAAATTG AAGTGTCGTT TGACATCGAC GCCAACGGCA TCCTGCATGT GGGCGCCAAG GACAAAGGCA CAGGTAAAGA AAACAAGATC ACGATCAAGG CCAATTCCGG CTTGACCGAA GCGGAAATTC AGCAAATGGT GAAAGACGCT GAGTTGAACG CCGCCGACGA CAAGCGCAAG CTTGACCTGG TGCAGGCCAA GAACCAGGCC GATGCCAGCT TGCACAGCGT GAAGAAGAGC CTGACCGAAT ACGGCGACAA GCTCGAAGCC GGCGAGAAGG AAAAGATCGA AGAAGCGATC AAGCACCTGG AAGAAGCCAT CAAAGGCGAC GATAAGGCGC ATATTGAGGA AAAAAGCACC GCTTTGATGA CCATCAGCCA GAAGCTGGGC GAAAAAATGT ATGCCGATAT GCAGGCCAAA CAAGCAGCTG AAGCGGGCGC AGGCGATCCA GGTGCCCAAG CGGCAGCGGG TGCACAAAAC ACTTCAAACC AGGCGGCTGA CGACAATGTG GTCGACGCGG AAGTGAAAGA AGTCAAAAAA GGTTAA
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Protein sequence | MGRIIGIDLG TTNSCVAIME GNTPKVIENS EGARTTPSII AYQEDGEVLV GASAKRQAVT NPKNTLYAVK RLIGRKFTEK EVQKDINLMP YKIAAADNGD AWVEVRGNRM APQQVSADVL RKMKKTAEDY LGETVTEAVI TVPAYFNDAQ RQATKDAGRI AGLDVKRIIN EPTAAALAYG LDKTEKGDRK IAVFDLGGGT FDVSIIEIAD VDGEKQFEVL STNGDTFLGG EDFDQRIIDF VIAEFKKEQG VDLGKDVLAL QRLKEAAEKA KIELSSSAQT DINLPYVTAD ASGPKHLSIK LTRAKLESLV EELIERTIAP CRTAIKDAGV NVADINDVIL VGGMTRMPKV QEKVKELFGR EPRKDVNPDE AVAVGAAIQG QVLSGDRKDV LLLDVTPLSL GIETLGGVMT KMITKNTTIP TKFAQTFSTA DDNQPAVTIK VFQGEREIAA GNKMLGEFNL EGIPPSARGT PQIEVSFDID ANGILHVGAK DKGTGKENKI TIKANSGLTE AEIQQMVKDA ELNAADDKRK LDLVQAKNQA DASLHSVKKS LTEYGDKLEA GEKEKIEEAI KHLEEAIKGD DKAHIEEKST ALMTISQKLG EKMYADMQAK QAAEAGAGDP GAQAAAGAQN TSNQAADDNV VDAEVKEVKK G
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