Gene Rfer_1951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1951 
Symbol 
ID3964133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp2095272 
End bp2096240 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content62% 
IMG OID637916770 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein-like 
Protein accessionYP_523207 
Protein GI89900736 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.176704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTAC TTGAAATTGA AAATCTGTCG GTCGATTTCC CTTCGACCAA CAGCGTGATG 
CACGCGGTCG AAGGTGTCAG TCTGTCACTG GACACCGGCG ACGTGCTGGG CATCGTCGGC 
GAATCCGGCT CCGGCAAAAG CGTCACCATG ATGGCGCTGA TGGGGCTGGT GGCCTACCCC 
GGTGTCGTCA CGGCCGACAA GCTGCGCTTT GACGGTCACG ACCTGCTCAA ACTCTCCACC 
AAAGAACGCA GCCAACTCAT CGGCAAAGAC GTGGCGATGA TCTTCCAGGA CCCCACCACC 
AGCCTCAACC CCTGCTTTAC CGTCGGCTTT CAACTGGCCG AGACGCTCAA GCTGCACCTG 
GGTCTGGACG CCAAGGCGGC CAAACGGCGC TCCATCGAAC TGCTGGAACA AGTCGGCATT 
CCGGCACCCG AGAGTCGCCT CAAGATCTAT CCGCATCAGA TGTCGGGCGG CATGAACCAG 
CGCGTCATGA TCGCCATGGC CATTTCCTGC AACCCCAAGC TGCTGATTGC CGATGAACCC 
ACCACCGCGC TGGACGTGAC GATTCAGGCC CAGATTCTGG ACTTGCTGCG CAGCCTGCAA 
AAAGAGCGTG GCATGGCGCT GGTGTTGATC ACGCACAACA TGGGCGTCGT GTCTGAGATG 
GCGCAACGCG TGGCGGTTAT GTACGCCGGC CAGATCATGG AAGAACAATC GGCGCAAACC 
CTGTTTGCCA CGCCGCACCA TCCCTACACC GAGGCGCTGA TGTCCGCCAT GCCCGAGCGC 
AGCGACGGCG TGAGCCGCCT GGCCACCATT CCCGGCATGG TGCCGGGCCT CTATGACCGG 
CCCAGTGGCT GCCTGTTTGC GCCGCGCTGT GCATACGCGG TGGACAGCTG CCGCGCCCAG 
CGCCCGCCCC TGCGCCCGTG GCAAGACGGC ATGGTGCGCT GCCAGTTTCC ACTCGGGGGA 
AAAGCATGA
 
Protein sequence
MALLEIENLS VDFPSTNSVM HAVEGVSLSL DTGDVLGIVG ESGSGKSVTM MALMGLVAYP 
GVVTADKLRF DGHDLLKLST KERSQLIGKD VAMIFQDPTT SLNPCFTVGF QLAETLKLHL 
GLDAKAAKRR SIELLEQVGI PAPESRLKIY PHQMSGGMNQ RVMIAMAISC NPKLLIADEP 
TTALDVTIQA QILDLLRSLQ KERGMALVLI THNMGVVSEM AQRVAVMYAG QIMEEQSAQT 
LFATPHHPYT EALMSAMPER SDGVSRLATI PGMVPGLYDR PSGCLFAPRC AYAVDSCRAQ 
RPPLRPWQDG MVRCQFPLGG KA