Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1943 |
Symbol | |
ID | 3964125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2086646 |
End bp | 2087641 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637916763 |
Product | tRNA-dihydrouridine synthase A |
Protein accession | YP_523200 |
Protein GI | 89900729 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAGCC CGAAACCCGT TCCCCCCGAC CGCTGGAGGC TGTCCGTTGC CCCGATGCTG GACTGGACCG ATCGCCATTG CCGTTATTTC CATCGCCTGC TCACACAGCA TGCGCTGCTT TACACCGAGA TGGTGACGAC TGGCGCCCTG ATTTATGGCG ACGTGTCACG TCACCTGCGC TACAACGAGC AAGAACATCC AGTCGCATTG CAGTTGGGTG GCAGCGAACC GGCCGACCTG GCGCGGTGTG CCAAGCTCGG TGAAGAGTGG GGTTATGACG AGGTCAACTT GAACTGTGGC TGCCCGAGCG AGCGGGTGCA GCGCGGCGCG TTTGGCGCCT GCCTGATGGC TGAGCCGCAG CTGGTGGCGG ATTGCGTCAA GGCGATGGTG GATGTGGTGT CGGTGCCGGT CACCGTGAAA CACCGAATTG GCATCGACAA AACCGAGAGT TACGAATTCG TGCGTGATTT TGTTGGCAGC GTCAGCGAGG CCGGCTGTCG CACTTTCATC GTGCACGCCC GCAATGCCTG GCTCAAGGGT CTGAGTCCAA AAGAAAACCG TGACGTGCCG CCCCTGCGCT ATGAGCTGGC CTACCAGCTC AAACGCGATT TTCCCTCGCT CGTCATCGTC ATCAATGGCG GCATCACCAG CAGCGCGCAG ATCGCCGGGC ACCTGTTGCA CCTGGACGGC GTGATGCTGG GGCGCGAGGC CTATCACAAC CCGTGGTGGC TGGCTTCCTG GGATGCGACG TTCTTCGGCG CTGACGCGAC AGAAACCACC CGCGAGCAGG TCGAGCAGCA GATGTGCGAC TACATGACGC GCGAAGCCGC CGAGCACGGC ACACCCTGGC CCACCATGGC CCGCCACATG CTGGGCTTGC GTCACGGACT GCCGGGTGCG CGTCACTGGC GCCAGGTCTG GAGTGATCAC AAGCTCAAGG GGCTGCCTGC GCATGATGTG ATGGCCCTGG CGCACACCCC GGTGCCGGCC ACGTAA
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Protein sequence | MLSPKPVPPD RWRLSVAPML DWTDRHCRYF HRLLTQHALL YTEMVTTGAL IYGDVSRHLR YNEQEHPVAL QLGGSEPADL ARCAKLGEEW GYDEVNLNCG CPSERVQRGA FGACLMAEPQ LVADCVKAMV DVVSVPVTVK HRIGIDKTES YEFVRDFVGS VSEAGCRTFI VHARNAWLKG LSPKENRDVP PLRYELAYQL KRDFPSLVIV INGGITSSAQ IAGHLLHLDG VMLGREAYHN PWWLASWDAT FFGADATETT REQVEQQMCD YMTREAAEHG TPWPTMARHM LGLRHGLPGA RHWRQVWSDH KLKGLPAHDV MALAHTPVPA T
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