| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1905 |
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| Symbol | |
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| ID | 3963234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2045500 |
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| End bp | 2046429 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637916725 |
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| Product | glutamate--tRNA ligase |
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| Protein accession | YP_523162 |
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| Protein GI | 89900691 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0217385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGCCC AATACATAGG GCGCTTTTCC CCCTCGCCCA CCGGACCGCT GCACGCGGGC
TCGCTGGTGG CGGCACTGGC CAGTTGGCTC GACGCCCGCG CCCACGCCGG CCAGTGGCTG
GTGCGTATCG AAGACGTGGA CACACCACGC TGCGTGGCTG GCATGGACCG GGTCATCCTG
CAGCAACTGG CCGCGTGTGG CCTGCACGCG GACCAGCCGC CCGTGTGGCA ATCGCAGCGC
ACCGGGCTCT ACCAGCAGGC GCTGGACCAG TTGGTGGTGC AGGGACTGGC CTACCCCTGT
GCCTGTTCAC GCAAGGACAT CGAAACCGCG CTGAGTCGTC TGGGCCAGGC GCGAGCACGC
CACGGCGAGC TGGTTTATCC GGGCACCTGC CGCACCGGCT TACACGGCCG CGTGGGGCGC
GCATGGCGGT TGCGCACTGA TTTGTTTAAG CAAAATAAGC CTCTAGCCAC CGTGGAATAT
ACGCAAGAAG CTACTAATTT AATAGCATGC AACATCATCC ACTGGACCGA CCGCCGCCTG
GGTGCGCAAC AGCAGGACGT GCCAGCGCAG GTGGGTGATT TTGTGCTCAA GCGCTTTGAC
GGCTGCTTTA CCTACCAGCT CGCCGTGGTG GTGGACGATG CGGCGCAGGG CATCACCGAT
GTGGTGCGCG GCGAGGATCT GGCGGACAAC ACGGCGCGGC AGATTCTGCT GCAGCAGTAT
TTGGGGCTGC CGACACCGCG CTACCTGCAC ACGCCACTGG TGCTGGGTGC CCATGGTGAG
AAATTGTCGA AACAAAATGG CGCGCAGGCA CTTGACACGA CCGAGCCGCT GGCCGCGTTG
AACCATGCCG CCCGCGTGCT GGGCTTGCCC GCTTGTAGTG GCAGCGTGGC GGGTGCACTG
GAGGCCTGGG TTGAAGCTTG GGACGCCTGA
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| Protein sequence | MVAQYIGRFS PSPTGPLHAG SLVAALASWL DARAHAGQWL VRIEDVDTPR CVAGMDRVIL
QQLAACGLHA DQPPVWQSQR TGLYQQALDQ LVVQGLAYPC ACSRKDIETA LSRLGQARAR
HGELVYPGTC RTGLHGRVGR AWRLRTDLFK QNKPLATVEY TQEATNLIAC NIIHWTDRRL
GAQQQDVPAQ VGDFVLKRFD GCFTYQLAVV VDDAAQGITD VVRGEDLADN TARQILLQQY
LGLPTPRYLH TPLVLGAHGE KLSKQNGAQA LDTTEPLAAL NHAARVLGLP ACSGSVAGAL
EAWVEAWDA
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