| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1827 |
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| Symbol | |
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| ID | 3961068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1964484 |
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| End bp | 1965965 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637916649 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_523086 |
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| Protein GI | 89900615 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCG GCACCAAAGA GCGGTTTGTC ACGGGCACGG GGCTCGCGAT CATTGCCCTT
ATTGCGGCGA TGATCTGGTG GACCTACTCG GAAGTCGAGG ACGCGAATCG CCAGCGCCGC
GTGACGACTG AGATCGGACA CGAACTCACC GAGCTGAGGC TGCTCACCTT CGAGTACAAC
CTGCACCACA ATGAACGGGC TCGGGTGCAG TGGACCGCGG TGTCGGACCA TGTTGACCAG
CTGATCGCGG ACGCCCGGTT CCGCAGGCCC GCGCAAAGCA AAATCCTGGC CGATTTGCGG
GGAAAAAGGG CGATAGGGCT GCGCCTCTTC ACCGAAATCA CCGCGGCAGA GCTCGCAGGC
CGCGGGGACG TCCCATTGGA CGAGGCGGGT CGGCGACATG AGGCGCAACT GCTGAGCCAA
CTGATGGTCT ACCAGCAGGA GAACTTCGCC GACGCGCAGC GCCTGACCGA CCTCGCGACG
CAGCGCATCA TGGACGCCGA ATGGCAGGTG ATGATTGCAA TCCTCGCCGG GCTGGCCTTG
ATCGCGTCAA TCATTGTCGC CACGTCATGG TTTCTGCGAC GCGGCGTGCT GATGCCGATC
GCCCAGCTCC AGCAGGCGAC GCGCCACGTT GCCGCGGGCA ATTGGAATTT TGTTCTTGAC
ATACGCGCCA AGGACGAGAT CGGTGAGTTG TCGAAAAATT TCGGCACCAT GACCCAATCG
CTGCAGGCAT CGTTTGCGCA GGTCGAGCGC AGCAACCAGG ATCTCGCGGC CTTGAACAGG
GAACTCGAAG CATTCAGCTA TTCCGTGTCC CACGATTTGC GCGGACCGCT GCGCAGCATG
GACGGCTTCT CACTGGTGCT GATCGAGGAC TACGGCGACA AACTGGACGA AGAGGGCAAG
GACGCCCTGC AGCGCATCCG TGCGGCGAGC CAGCGCATGG GCAACCTCAT CGACGACTTG
CTCCGATTGT CCCAGGTGAC ACGGGCCGAG CTCAACGTGA CGCGGGTCGA CCTCAGTGCA
ATCGCGCAGG ACATCGCCGA TACCCTGGAC CGGGAGCAGC CCGATCGGTC GACAAAATGG
GAAATTCAAC CTGGCTTGAG CCTCCACGCC GACCTGGCGC TGACGCGAAT CGCCATGCAA
AACCTGCTCC AGAACGCCTG GAAATTTACC GGCAGATCCG GGCAACCGGT GATTCGCGTT
GGTGCACTGG AACGCGACTC GAAAACGATA TTTTTCGTCG CCGACAACGG CGTCGGTTTC
GACATGGCGC ACGCGGCCAA TCTCTTCGGC GCCTTCCAGC GGCTGCACCA CGTTGAGGAT
TTCCCCGGCA CCGGGATCGG TCTGGCGATC GTCCAGCGGA TCATCCGTCG GCACGACGGA
AAGCTCTGGG CCGAGGCGAA GGAAGGCGAA GGCGCGACGT TCTTTTTCAC TCTGAAGGAA
TCGAAAAATG GATCAAATGA ACAAGACCAT CCTGCTGGTT GA
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| Protein sequence | MKIGTKERFV TGTGLAIIAL IAAMIWWTYS EVEDANRQRR VTTEIGHELT ELRLLTFEYN
LHHNERARVQ WTAVSDHVDQ LIADARFRRP AQSKILADLR GKRAIGLRLF TEITAAELAG
RGDVPLDEAG RRHEAQLLSQ LMVYQQENFA DAQRLTDLAT QRIMDAEWQV MIAILAGLAL
IASIIVATSW FLRRGVLMPI AQLQQATRHV AAGNWNFVLD IRAKDEIGEL SKNFGTMTQS
LQASFAQVER SNQDLAALNR ELEAFSYSVS HDLRGPLRSM DGFSLVLIED YGDKLDEEGK
DALQRIRAAS QRMGNLIDDL LRLSQVTRAE LNVTRVDLSA IAQDIADTLD REQPDRSTKW
EIQPGLSLHA DLALTRIAMQ NLLQNAWKFT GRSGQPVIRV GALERDSKTI FFVADNGVGF
DMAHAANLFG AFQRLHHVED FPGTGIGLAI VQRIIRRHDG KLWAEAKEGE GATFFFTLKE
SKNGSNEQDH PAG
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