| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1800 |
|---|
| Symbol | |
|---|
| ID | 3962197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 1938696 |
|---|
| End bp | 1939061 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637916623 |
|---|
| Product | succinate dehydrogenase, cytochrome b subunit |
|---|
| Protein accession | YP_523060 |
|---|
| Protein GI | 89900589 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2142] Succinate dehydrogenase, hydrophobic anchor subunit |
|---|
| TIGRFAM ID | [TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.211028 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTTA ATTTTGGTCC TCATCGCCTT GTTGTCGGAG CTCACTACGG TATGCGCGAC
TGGCTTTCCC AACGTGTGAC CGCTGTCCTG ATGGCGCTGT TTACCGTGCT GGTTCTGGCC
GAGCTTATAT TTACCAAGGG CCCTATCGGC TATGCCCAAT GGGCCGGTAT TTTTTCACCG
CAATGGATGA AGGCTTTGAC CTTTACCGTC ATCCTCTCCC TGCTCTACCA CGTGTGGGTT
GGCATGCGTA ACATCTTCCA GGACTACGTC CATCCCTATG GCGTTCGCTT TGTCCTGGAC
GTATTTGCCA TCGTCTGGCT GGTCAGCTGC GCAGGCTGGG GCATTCAAGT CTTGTGGCGC
CTGTAA
|
|---|
| Protein sequence | MSVNFGPHRL VVGAHYGMRD WLSQRVTAVL MALFTVLVLA ELIFTKGPIG YAQWAGIFSP
QWMKALTFTV ILSLLYHVWV GMRNIFQDYV HPYGVRFVLD VFAIVWLVSC AGWGIQVLWR
L
|
|---|
| |