| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1709 |
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| Symbol | |
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| ID | 3962507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1839921 |
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| End bp | 1841525 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637916532 |
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| Product | hypothetical protein |
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| Protein accession | YP_522969 |
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| Protein GI | 89900498 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTTC CAAACATTTC TTTCCGGGAA GCGGATGGAC AGGTGTTCTT GCGCTGCGAG
CCAGCGCCAG AGCGCCTGCC TGTTGACAGC GCCGCACTGC ATACCCTGCT GGCACAAGCC
GGGTATGGCG ATTGCCTGCT GCACGAAGAG GCGATTGCCA GTGCTGCCCA CGATTGCAAC
ACCCAGCAAA GCCCCTTCGA GCGGCTGCTA GCCCAGCGCA GCGACGCCAC GATCCAGGTC
CACATTGCGC CCGACGAAAT GGCAGCCGAG ATCAGCCTGA GTCCCGCACA CGGCGGCAAG
ACGATCGCCA TGGAAGACCT CATGCGGGCG CTGGCTGAGG CGGGCGTCCT GTTCGGCGTC
GACGAAGCGG CACTGCTGCG GGCCTGTGAG CCGGGAGTCT GCGAGCGTGT GCTGGTGGCC
CGTGGTGTCA AAGCCGAAGA CGGGCGTGAC ACCGTTTTTG AAGCAATGAT CCCGCAAGCA
GTGGACCGCG TACCCCAGCT GGATGAAAAT GGCCTGATCG ACTACCGGGA GCACGGCAGC
ATTGACTCGG TACAGGCGGG TGCGCCTCTG ATGCGCCGCA TTCCGCCGAC GGCCGGCGTT
GTCGGCCATA GCATCCGTGG CCGTGTGCTG GCGCCCCGCC CCGGACGCGA CGAGCCTTTT
GCCGCCGGAC TGACTGGCGC GCAGATGGCC AGCGACGACC CCAACCTGCT GCTGGCAGCG
GTGAGCGGGC AACCGGTGCG GGTCAAAGGC GGCATCATGG TGGAGCCGAT CCTGCGGGTC
GCGGAAGTCA ACATGGCGAC CGGCAACATC CACTATGACG GCACCGTGCA GGTCGATGGC
GACGTCCTGC AGGGCATGAA AGTCCGGGCG AGCGGCGACA TCGTGGTCAA GGGCATGGTG
GACGGCGGGC TTCTCGAGGC CGGTGGCAAT ATTCAAGTGA CAGGGGGCGT CATCGCCCAT
GCCAGGCTGC GCGCAGGTGG CTCAGTCAGC GCACGTTTTG CAGAAGGCGC CCATATTGAT
GCCGGTACCG TGATTGCACT GGACGACATG GCTTTGGAGT GTGAATTGCA GTCACTCAAC
CAAATCGTCA TCGGCGCCGC TTCGCCCACG CGCGGACGCA TGTTTGGAGG CTCGGCCACC
GCCATGATGC TGATCAAGGT GCCCTTGCTG GGCTCGGCCA AGACCGGTGT GACGCAACTG
GTGCTGGGCG CCAACGCGGA GCTGCAGGCC AAATACCAGG CGCTGCAAGA GCGCATCGCC
AAAGAAAAAT CGATTGAAGA GAACCTGGAA AAACTGGCCA AGCAACTGAC GGCCGCGGGG
GACCCCAAGG GACTGTTGGA GCGTGTCAAG GCCTCCAGAG TGCACGCCGT GCAGGTTTGG
GGCCAATCCC TGGTTGAACA AGTTGAGCTG GAAAAGCAAA TCGCGCTGGG ACGCGCCGCC
AAGCTTGAGG TGAGCGTTGG CGTGGCCGGG GCGGTGGACC TGCGCTTTGA CAAACTGATG
GCACGGCTGC GTCAGGAATC CGGCGCCGGC ACCTTCTGCG TTGACGAGCA AGGGCAAGTG
GTGTTCATCA ACACCTCGGG ACAGGCGCTA CCAATCACTT CGTGA
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| Protein sequence | MDLPNISFRE ADGQVFLRCE PAPERLPVDS AALHTLLAQA GYGDCLLHEE AIASAAHDCN
TQQSPFERLL AQRSDATIQV HIAPDEMAAE ISLSPAHGGK TIAMEDLMRA LAEAGVLFGV
DEAALLRACE PGVCERVLVA RGVKAEDGRD TVFEAMIPQA VDRVPQLDEN GLIDYREHGS
IDSVQAGAPL MRRIPPTAGV VGHSIRGRVL APRPGRDEPF AAGLTGAQMA SDDPNLLLAA
VSGQPVRVKG GIMVEPILRV AEVNMATGNI HYDGTVQVDG DVLQGMKVRA SGDIVVKGMV
DGGLLEAGGN IQVTGGVIAH ARLRAGGSVS ARFAEGAHID AGTVIALDDM ALECELQSLN
QIVIGAASPT RGRMFGGSAT AMMLIKVPLL GSAKTGVTQL VLGANAELQA KYQALQERIA
KEKSIEENLE KLAKQLTAAG DPKGLLERVK ASRVHAVQVW GQSLVEQVEL EKQIALGRAA
KLEVSVGVAG AVDLRFDKLM ARLRQESGAG TFCVDEQGQV VFINTSGQAL PITS
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