Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1681 |
Symbol | |
ID | 3960693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1811489 |
End bp | 1813108 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637916505 |
Product | cytochrome-c oxidase |
Protein accession | YP_522942 |
Protein GI | 89900471 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.793322 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGCCG TTCTAGACCG CGACGACCAC GTCGAGCATG ACCACCACAG CCACGCACCC ACCGGCTGGC GCCGCTGGGT GTACGCGACC AACCACAAGG ACATCGGTAC TTTGTACATG TGTTTCAGCC TGACCATGCT GATGATTGGC GGCGTGCTGG CCCTGCTGAT TCGAGCTGAG CTGTTTCAGC CCGGCCTGCA ACTGGTGAAT CCTGAGCTTT TCAACCAGCT CACCACCATG CACGGCATCA TCATGGTGTT CGGCGCCATC ATGCCGGGCT TTGTGGGTTT TGCCAACTGG ATGATTCCGC TGCAAATTGG CGCCTCGGAC ATGGCGTTTG CCCGCATGAA TAACTTCAGC TTCTGGCTGA TGGTTCCTGC CGCTGTGATG CTGGTGAGTT CATTCTTCAT GCCGGGAGGC GCGCCAGCAG CAGGCTGGAC GCTGTACGCG CCACTGACCC TGCAAATGGG CCCGAGCATG GACGCCGGCA TTTTTGCCAT GCATTTATTG GGTGCGAGCT CCATCATGGG TTCCATCAAC ATCATCGTGA CCGTGCTCAA CATGCGCGCC CCGGGCATGA CCTTGATGAA AATGCCGATG TTTTCCTGGA CCTGGCTGAT TACGGCGTAT TTGCTGATCG CCGTGATGCC GGTGCTGGCC GGCGCCATCA CCATGACCTT GACCGACCGC CATTTCGGTA CCAGCTTCTT CAACCCGGCC GGTGGTGGCG ACCCGGTGAT GTACCAGCAC ATTTTCTGGT TCTTCGGTCA CCCGGAGGTC TACATCATGA TCTTGCCGGC ATTTGGCATC ATCAGCCAGA TCGTGCCGGC GTTTGCGCGC AAAAAATTGT TTGGCTACGC GTCCATGGTC TATGCCACTT CAAGCATTGC GATCCTGTCC TTCATTGTGT GGGGACATCA CATGTTTTCC ACCGGCATGC CGGTGACCGG TCAGTTGTTT TTCATGTATG CCACCATGCT GGTCGCCGTG CCGACGGCTG TGAAGATTTT CAACTGGGTG GCCACGATGT GGCGGGGTTC CATGACCTTT GAGACCCCGA TGCTGTTTGC GGTGGGCTTC ATCTTCGTCT TCACCATGGG TGGTTTTACC GGCCTGATTC TGGCCATGGC ACCGATTGAC ATCCAGGTGC AGGACACTTA TTACGTGGTG GCCCATTTCC ACTACGTGCT GGTGGCCGGT TCCTTGTTTG CCATGTTTGC CGGCTACTAC TACTGGTCAC CCAAGTGGAC TGGTGTCATG TACAACGAAA CACGCGGCAA GATCCACTTC TGGTGGTCAC TGATTGCATT CAACGTCACT TTCTTCCCGA TGCATTTTCT CGGGCTGGCC GGCATGCCGC GCCGCTATGC CGATTACCCG ATGCAATTTG CCGATTTCAA TGCGGTGGCC TCGGTAGGTG CTTTCTTCTT TGGCTTTGCA CAGGTCTTTT TCCTGCTCTT CATCGTGACC CCCACCATGA TGGGCAAAGG CCAAAAGGCG CCGCAAAGGC CTTGGGAAGG CGCGGAAGGT CTGGAGTGGG AAGTGCCTTC GCCGGCACCG TTCCACACCT TCGAGACGCC GCCCAAGCTG GATGCCACGG CAACCAAGGT TATTGCTTAG
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Protein sequence | MSAVLDRDDH VEHDHHSHAP TGWRRWVYAT NHKDIGTLYM CFSLTMLMIG GVLALLIRAE LFQPGLQLVN PELFNQLTTM HGIIMVFGAI MPGFVGFANW MIPLQIGASD MAFARMNNFS FWLMVPAAVM LVSSFFMPGG APAAGWTLYA PLTLQMGPSM DAGIFAMHLL GASSIMGSIN IIVTVLNMRA PGMTLMKMPM FSWTWLITAY LLIAVMPVLA GAITMTLTDR HFGTSFFNPA GGGDPVMYQH IFWFFGHPEV YIMILPAFGI ISQIVPAFAR KKLFGYASMV YATSSIAILS FIVWGHHMFS TGMPVTGQLF FMYATMLVAV PTAVKIFNWV ATMWRGSMTF ETPMLFAVGF IFVFTMGGFT GLILAMAPID IQVQDTYYVV AHFHYVLVAG SLFAMFAGYY YWSPKWTGVM YNETRGKIHF WWSLIAFNVT FFPMHFLGLA GMPRRYADYP MQFADFNAVA SVGAFFFGFA QVFFLLFIVT PTMMGKGQKA PQRPWEGAEG LEWEVPSPAP FHTFETPPKL DATATKVIA
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