| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1656 |
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| Symbol | |
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| ID | 3962775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1787588 |
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| End bp | 1788403 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637916479 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_522917 |
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| Protein GI | 89900446 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGAAT TGCCTGAGGT TGAAGTCACA CGGTTGAGTT TTGCCTTCGA AATAGCAGGC
GCAAGAGTCA TTTCTGTGCG CATCGGTAAA CCGTTGCGCT GGCCGTTGGG ATGTTCTCCC
ACCCAGTTGG CGGGGCGATC CGTGCAGGCA GTGCGCAGAC GTGGCAAGTA CTTGTTGATT
GATCTTGATC AAGGCTTGCT GCTGGTTCAC TTGGGCATGT CCGGCAGCTT GAGTTTTGCC
AGGCAATTGC CACCCGCTGG CGCCCATGAC CATTTTGAGA TGACAACCAC CCTTGGCACG
CTGCGACTCA CTGACCCCCG CCGGTTTGGG GCGGTGGTTT ACGCAAAAGG TGAAGACGCA
CCCGAAGCCC ACAAACTTTT GGGCAAACTG GGCATGGAGC CTTTGTCTGA TGATTTTGAT
GTCGACCGCT TTCATGATGA ATTGAAGCGC CGCAGAGCGG CGATCAAGCA GGTATTGCTG
GCGGGTGACA CGGTGGTGGG CGTGGGCAAT ATTTACGCGT CAGAAGCACT GTTTATGGCC
GGCATTCGAC CAACCTTGAG CGCTGCCCGA CTCAGTCGGC CGCGCAGCGC CAGACTGCAC
GCAGCGATCC GGGATGTGCT GGCGCGCGCG GTGGCAACGG GCGGCAGCAC GCTGCGGGAC
TTTTCCAGCG CAAAAGGCGA GAACGGGCAT TTTCAGCTGG AAGCCATGGT TTATGCCCGG
CAAGGTCAGC CCTGCCGGGT CTGCGCAACG CCCATCAAAT CCCTCCGACA AGGTCAGCGG
TCGACGTTCT ACTGCCCTCA TTGCCAGAAA GCCTAG
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| Protein sequence | MPELPEVEVT RLSFAFEIAG ARVISVRIGK PLRWPLGCSP TQLAGRSVQA VRRRGKYLLI
DLDQGLLLVH LGMSGSLSFA RQLPPAGAHD HFEMTTTLGT LRLTDPRRFG AVVYAKGEDA
PEAHKLLGKL GMEPLSDDFD VDRFHDELKR RRAAIKQVLL AGDTVVGVGN IYASEALFMA
GIRPTLSAAR LSRPRSARLH AAIRDVLARA VATGGSTLRD FSSAKGENGH FQLEAMVYAR
QGQPCRVCAT PIKSLRQGQR STFYCPHCQK A
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